Factsheet for AT5G15650.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90981	Canola	cytosol, extracellular, peroxisome	91.94	97.07
CDY26446	Canola	cytosol	90.0	96.72
Bra023530.1-P	Field mustard	cytosol, extracellular, peroxisome	91.39	96.48
CDX85541	Canola	peroxisome	91.39	96.48
CDX69510	Canola	cytosol	89.72	96.42
Bra008683.1-P	Field mustard	cytosol	95.56	96.36
CDX78646	Canola	plasma membrane	91.11	96.19
Bra006315.1-P	Field mustard	cytosol	96.11	95.32
CDX70629	Canola	peroxisome	90.28	95.31
AT3G02230.1	Thale cress	cytosol	93.89	94.68
AT3G08900.1	Thale cress	cytosol	81.39	80.94
AT5G50750.1	Thale cress	cytosol	75.56	74.73
AT5G16510.2	Thale cress	cytosol	47.22	48.85

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EntrezGene:831419	UniProt:A0A178UG61	ProteinID:AED92188.1	EMBL:AF013628
ArrayExpress:AT5G15650	EnsemblPlantsGene:AT5G15650	RefSeq:AT5G15650	TAIR:AT5G15650	RefSeq:AT5G15650-TAIR-G	EnsemblPlants:AT5G15650.1
TAIR:AT5G15650.1	EMBL:AY039846	EMBL:AY087476	EMBL:AY120691	ProteinID:CAC01764.1	GO:GO:0003674
GO:GO:0003735	GO:GO:0003824	GO:GO:0005198	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829
GO:GO:0005840	GO:GO:0005975	GO:GO:0006139	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009628	GO:GO:0009651	GO:GO:0009832
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016740	GO:GO:0016853	GO:GO:0016866
GO:GO:0019567	GO:GO:0022626	GO:GO:0030244	GO:GO:0030312	GO:GO:0033356	GO:GO:0042788
GO:GO:0046686	GO:GO:0052691	GO:GO:0071555	GO:GO:0071669	InterPro:IPR029044	EMBL:KJ138688
RefSeq:NP_197069.1	InterPro:Nucleotide-diphossugar_trans	ProteinID:OAO92157.1	PFAM:PF03214	PIRSF:PIRSF016429	PO:PO:0000005
PO:PO:0000293	PO:PO:0001170	PO:PO:0007131	PO:PO:0009005	PO:PO:0009025	PO:PO:0025281
PANTHER:PTHR31682	PANTHER:PTHR31682:SF15	UniProt:Q9LFW1	InterPro:RGP	Symbol:RGP2	InterPro:RGP_fam
SUPFAM:SSF53448	UniParc:UPI00000AB2FD	UniProt:W8QN98	:	:	:

Description

RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]

Coordinates

chr5:+:5092140..5095302

Molecular Weight (calculated)

40892.4 Da

IEP (calculated)

5.987

GRAVY (calculated)

-0.193

Length

360 amino acids

Sequence
(BLAST)

001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.