Factsheet for AT3G08900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001338.1-P	Field mustard	cytosol	94.2	93.68
CDY27964	Canola	cytosol	71.82	91.23
CDY64941	Canola	cytosol	84.53	89.21
Bra029728.1-P	Field mustard	cytosol	92.54	88.62
CDY00647	Canola	cytosol	70.99	88.01
VIT_14s0083g01100.t01	Wine grape	cytosol	84.53	85.24
Solyc02g089170.2.1	Tomato	cytosol, unclear	81.49	83.81
PGSC0003DMT400003478	Potato	cytosol	82.04	83.66
Solyc03g070390.2.1	Tomato	cytosol, unclear	80.39	83.14
PGSC0003DMT400068326	Potato	cytosol	80.66	82.95
AT3G02230.1	Thale cress	cytosol	81.49	82.63
AT5G15650.1	Thale cress	cytosol	80.94	81.39
Solyc02g065740.2.1	Tomato	cytosol, unclear	80.39	81.06
AT5G50750.1	Thale cress	cytosol	72.38	71.98
AT5G16510.2	Thale cress	cytosol	45.86	47.7
CDY27965	Canola	cytosol	3.31	46.15
PGSC0003DMT400019802	Potato	cytosol	47.51	41.85

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EntrezGene:820039	ProteinID:AAF07834.1	ProteinID:AEE74693.1	EMBL:AF034255
EMBL:AK118676	ArrayExpress:AT3G08900	EnsemblPlantsGene:AT3G08900	RefSeq:AT3G08900	TAIR:AT3G08900	RefSeq:AT3G08900-TAIR-G
EnsemblPlants:AT3G08900.1	TAIR:AT3G08900.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829
GO:GO:0005975	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506
GO:GO:0009832	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016740	GO:GO:0016853
GO:GO:0016866	GO:GO:0030244	GO:GO:0033356	GO:GO:0052691	GO:GO:0071555	GO:GO:0071669
InterPro:IPR029044	EMBL:KJ138834	RefSeq:NP_187502.2	InterPro:Nucleotide-diphossugar_trans	UniProt:O22666	PFAM:PF03214
PIRSF:PIRSF016429	PO:PO:0000005	PO:PO:0000293	PO:PO:0007611	PO:PO:0009031	PO:PO:0009046
PO:PO:0009089	PO:PO:0025022	PANTHER:PTHR31682	PANTHER:PTHR31682:SF14	InterPro:RGP	Symbol:RGP3
InterPro:RGP_fam	SUPFAM:SSF53448	UniParc:UPI00000A13CB	UniProt:W8Q6U1	:	:

Description

RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]

Coordinates

chr3:-:2708086..2709949

Molecular Weight (calculated)

41283.7 Da

IEP (calculated)

5.269

GRAVY (calculated)

-0.213

Length

362 amino acids

Sequence
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.