Factsheet for Bra029728.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64941	Canola	cytosol	88.36	97.38
CDY27964	Canola	cytosol	72.75	96.49
Bra001338.1-P	Field mustard	cytosol	91.01	94.51
AT3G08900.1	Thale cress	cytosol	88.62	92.54
VIT_14s0083g01100.t01	Wine grape	cytosol	80.95	85.24
PGSC0003DMT400068326	Potato	cytosol	78.57	84.38
Solyc02g089170.2.1	Tomato	cytosol, unclear	78.31	84.09
PGSC0003DMT400003478	Potato	cytosol	78.84	83.94
Solyc03g070390.2.1	Tomato	cytosol, unclear	76.72	82.86
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	78.04	82.63
Bra021473.1-P	Field mustard	cytosol	77.78	82.35
Bra001037.1-P	Field mustard	cytosol	77.78	82.35
Solyc02g065740.2.1	Tomato	cytosol, unclear	78.04	82.17
Bra008683.1-P	Field mustard	cytosol	77.51	82.07
Bra006315.1-P	Field mustard	cytosol	77.51	80.72
Bra023530.1-P	Field mustard	cytosol, extracellular, peroxisome	72.75	80.65
Bra000628.1-P	Field mustard	cytosol	69.84	73.54
CDY27965	Canola	cytosol	3.44	50.0
Bra008616.1-P	Field mustard	cytosol	44.71	48.56
Bra006359.1-P	Field mustard	cytosol	11.9	42.86
Bra023571.1-P	Field mustard	cytosol	11.9	42.45
PGSC0003DMT400019802	Potato	cytosol	46.03	42.34

Protein Annotations

EnsemblPlants:Bra029728.1	EnsemblPlants:Bra029728.1-P	EnsemblPlantsGene:Bra029728	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
GO:GO:0071669	InterPro:RGP	InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF14
PFAM:PF03214	PIRSF:PIRSF016429	UniParc:UPI0002547CED	UniProt:M4ELQ9	MapMan:3.13.7.3	:

Description

AT3G08900 (E=3e-108) RGP3, RGP | RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); transferase, transferring hexosyl groups

Coordinates

chrA05:+:22490870..22492234

Molecular Weight (calculated)

43201.0 Da

IEP (calculated)

5.276

GRAVY (calculated)

-0.270

Length

378 amino acids

Sequence
(BLAST)

001: MSQLYSSMKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSRTIHIPKG FDYELYNRND INRILGPKSS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAEDPSGKGI NALEQHIKNL LSPSTPHFFN TLYDPYGDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE RNSRKVYLST
201: QLPILYVDAV MTIPKGTLFP MCGMNLAFDR ELIGPAMYFG LMGDGQPIGR YDDMWAGWCV KVICDHMGWG VKTGLPYIWH SKASNPFVNL RKEYNGIFWQ
301: EEAIPFFQSV TLPKECDSVQ QCYMELAKLV KEKLGKVDPY FIKLADGMVT WIEAWDELNA PKGTETNAPN AKDEKVTE

Best Arabidopsis Sequence Match ( AT3G08900.1 )
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN

Arabidopsis Description

RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.