Factsheet for Bra001338.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G08900.1	Thale cress	cytosol	93.68	94.2
CDY00647	Canola	cytosol	74.18	92.47
Bra029728.1-P	Field mustard	cytosol	94.51	91.01
VIT_14s0083g01100.t01	Wine grape	cytosol	84.62	85.79
PGSC0003DMT400003478	Potato	cytosol	82.97	85.07
Solyc02g089170.2.1	Tomato	cytosol, unclear	81.87	84.66
PGSC0003DMT400068326	Potato	cytosol	81.04	83.81
Solyc03g070390.2.1	Tomato	cytosol, unclear	80.22	83.43
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	81.32	82.91
Bra021473.1-P	Field mustard	cytosol	81.04	82.63
Bra001037.1-P	Field mustard	cytosol	81.04	82.63
Bra008683.1-P	Field mustard	cytosol	80.77	82.35
Solyc02g065740.2.1	Tomato	cytosol, unclear	80.77	81.89
Bra023530.1-P	Field mustard	cytosol, extracellular, peroxisome	76.1	81.23
Bra006315.1-P	Field mustard	cytosol	80.77	80.99
Bra000628.1-P	Field mustard	cytosol	74.18	75.21
Bra008616.1-P	Field mustard	cytosol	46.7	48.85
Bra023571.1-P	Field mustard	cytosol	12.64	43.4
Bra006359.1-P	Field mustard	cytosol	12.36	42.86
PGSC0003DMT400019802	Potato	cytosol	47.8	42.34

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EnsemblPlantsGene:Bra001338	EnsemblPlants:Bra001338.1	EnsemblPlants:Bra001338.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016866	GO:GO:0030244	GO:GO:0071669	InterPro:IPR029044	UniProt:M4CAV9	InterPro:Nucleotide-diphossugar_trans
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF14	InterPro:RGP	InterPro:RGP_fam
SUPFAM:SSF53448	UniParc:UPI0002540618	:	:	:	:

Description

AT3G08900 (E=5e-210) RGP3, RGP | RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); transferase, transferring hexosyl groups

Coordinates

chrA03:+:15914039..15915498

Molecular Weight (calculated)

41573.0 Da

IEP (calculated)

5.474

GRAVY (calculated)

-0.307

Length

364 amino acids

Sequence
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSRTINIPKG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPSGKEI NALEQHIKNL LTPSTPHFFN TLYDPYGDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE RNSRKYVDAV
201: MTIPKGTLFP MCGMNLAFDR ELIGPAMYFG LMGDGQPIGR YDDMWAGWCV KVICDHMGWG VKTGLPYIWH SKASNPFVNL RKEYNGIFWQ EEAIPFFQSL
301: ALPKECTSVQ QCYMEMAKLV KEKLGKVDPY FNKLADGMVT WIEAWEELNS PDGAEAKAPK GKDE

Best Arabidopsis Sequence Match ( AT3G08900.1 )
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN

Arabidopsis Description

RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.