Factsheet for VIT_14s0083g01100.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068326	Potato	cytosol	87.74	89.49
PGSC0003DMT400003478	Potato	cytosol	88.02	89.01
Solyc02g089170.2.1	Tomato	cytosol, unclear	86.91	88.64
Solyc02g065740.2.1	Tomato	cytosol, unclear	87.47	87.47
Solyc03g070390.2.1	Tomato	cytosol, unclear	85.24	87.43
VIT_01s0011g00160.t01	Wine grape	cytosol	87.74	87.26
VIT_17s0000g05030.t01	Wine grape	cytosol	86.91	87.15
Bra001338.1-P	Field mustard	cytosol	85.79	84.62
AT3G08900.1	Thale cress	cytosol	85.24	84.53
VIT_17s0000g01290.t01	Wine grape	cytosol	85.24	82.7
CDY27964	Canola	cytosol	65.46	82.46
CDY00647	Canola	cytosol	66.3	81.51
Bra029728.1-P	Field mustard	cytosol	85.24	80.95
CDY64941	Canola	cytosol	77.16	80.76
VIT_05s0020g03250.t01	Wine grape	cytosol	13.37	63.16
VIT_13s0106g00180.t01	Wine grape	cytosol	13.65	60.49
VIT_04s0023g00110.t01	Wine grape	cytosol	48.75	49.02
CDY27965	Canola	cytosol	3.34	46.15
PGSC0003DMT400019802	Potato	cytosol	50.42	44.04

Protein Annotations

KEGG:00520+5.4.99.30	EntrezGene:100248032	wikigene:100248032	MapMan:3.13.7.3	EMBL:AM470546	ProteinID:CAN65977
ProteinID:CAN65977.1	ProteinID:CCB44087	ProteinID:CCB44087.1	UniProt:F6GVV2	EMBL:FN594955	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005829	GO:GO:0005975	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009506	GO:GO:0009832	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244	GO:GO:0033356
GO:GO:0052691	GO:GO:0071669	InterPro:IPR029044	EntrezGene:LOC100248032	wikigene:LOC100248032	InterPro:Nucleotide-diphossugar_trans
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	InterPro:RGP	InterPro:RGP_fam
SUPFAM:SSF53448	TIGR:TC55314	TIGR:TC63046	UniParc:UPI00015C8ECE	ArrayExpress:VIT_14s0083g01100	EnsemblPlantsGene:VIT_14s0083g01100
EnsemblPlants:VIT_14s0083g01100.t01	unigene:Vvi.5932	RefSeq:XP_002281356	RefSeq:XP_002281356.1	:	:

Description

No Description!

Coordinates

chr14:-:23425741..23428785

Molecular Weight (calculated)

40506.8 Da

IEP (calculated)

6.360

GRAVY (calculated)

-0.174

Length

359 amino acids

Sequence
(BLAST)

001: MAAPSSTATP LLKDELDIVI PTIRNLDFLE MWRPFFQPYH LIIVQDGDPS KTIKVPDGFD YELYNRNDIN KILGPKASCI SFKDSACRCF GYMVSKKKYI
101: FTIDDDCFVA KDPSGKQINA LEQHIKNLLS PSTPFFFNTL YDPFREGADY VRGYPFSLRE GVPTAVSHGL WLNIPDYDAP TQLVKPLERN TRFVDAVLTI
201: PKGTLFPMCG MNLAFDRDLI GPAMYFGLMG DGQPIGRYDD MWAGWCVKVT CDHLGLGVKT GLPYIWHSKA SNPFVNLKKE YNGIFWQEEI IPFFQSVSLP
301: KDCTTVQKCY VELAKLVKEK LGKVDPYFVK LGDAMVTWIE AWDELNPAGG SAKRPNGTA

Best Arabidopsis Sequence Match ( AT3G08900.1 )
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN

Arabidopsis Description

RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.