Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr2P13620_001 | Banana | cytosol | 63.16 | 22.64 |
VIT_17s0000g01290.t01 | Wine grape | cytosol | 72.37 | 14.86 |
VIT_17s0000g05030.t01 | Wine grape | cytosol | 65.79 | 13.97 |
VIT_01s0011g00160.t01 | Wine grape | cytosol | 65.79 | 13.85 |
Os03t0599800-01 | Rice | extracellular | 65.79 | 13.74 |
PGSC0003DMT400072896 | Potato | cytosol, mitochondrion | 64.47 | 13.54 |
Solyc05g012070.2.1 | Tomato | extracellular | 64.47 | 13.54 |
PGSC0003DMT400004878 | Potato | cytosol, extracellular | 64.47 | 13.5 |
EER91258 | Sorghum | cytosol | 64.47 | 13.46 |
Zm00001d033174_P001 | Maize | plasma membrane | 64.47 | 13.46 |
Zm00001d013751_P005 | Maize | plastid | 64.47 | 13.46 |
Solyc04g005340.2.1 | Tomato | cytosol, extracellular, nucleus, plastid, unclear | 63.16 | 13.45 |
VIT_14s0083g01100.t01 | Wine grape | cytosol | 63.16 | 13.37 |
TraesCS4A01G166900.1 | Wheat | cytosol | 64.47 | 13.32 |
TraesCS4B01G144900.1 | Wheat | cytosol, extracellular, golgi, unclear | 64.47 | 13.32 |
EES03655 | Sorghum | cytosol | 61.84 | 13.31 |
TraesCS3D01G298600.1 | Wheat | cytosol, unclear | 61.84 | 13.24 |
TraesCS3B01G333100.1 | Wheat | cytosol, golgi | 61.84 | 13.2 |
HORVU3Hr1G073780.1 | Barley | cytosol | 61.84 | 13.2 |
TraesCS3A01G303200.1 | Wheat | cytosol, extracellular, golgi | 61.84 | 13.13 |
HORVU4Hr1G038960.2 | Barley | cytosol, plasma membrane | 63.16 | 12.94 |
TraesCS4D01G151900.2 | Wheat | cytosol, golgi | 64.47 | 11.98 |
VIT_04s0023g00110.t01 | Wine grape | cytosol | 35.53 | 7.56 |
VIT_13s0106g00180.t01 | Wine grape | cytosol | 1.32 | 1.23 |
Protein Annotations
KEGG:00520+5.4.99.30 | MapMan:3.13.7.3 | ProteinID:CCB50413 | ProteinID:CCB50413.1 | UniProt:F6HDP2 | EMBL:FN595749 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005794 | GO:GO:0005829 | GO:GO:0005975 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009832 | GO:GO:0009987 | GO:GO:0016866 | GO:GO:0030244 | GO:GO:0033356 |
GO:GO:0052691 | PFAM:PF03214 | PANTHER:PTHR31682 | PANTHER:PTHR31682:SF6 | InterPro:RGP_fam | UniParc:UPI000210A129 |
ArrayExpress:VIT_05s0020g03250 | EnsemblPlantsGene:VIT_05s0020g03250 | EnsemblPlants:VIT_05s0020g03250.t01 | : | : | : |
Description
No Description!
Coordinates
chr5:-:5018464..5019799
Molecular Weight (calculated)
8801.6 Da
IEP (calculated)
8.208
GRAVY (calculated)
-0.124
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MIRVSEGFNY ELYDRNDVNR ILGSKTSRIS FKDSACCCFG FLVSKRKHIF PIDDDCFIAK DPIRKEIVVF GAWSCQ
001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN
Arabidopsis Description
RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.