Factsheet for TraesCS4A01G166900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G144900.1	Wheat	cytosol, extracellular, golgi, unclear	98.64	98.64
HORVU4Hr1G038960.2	Barley	cytosol, plasma membrane	98.1	97.3
Os03t0599800-01	Rice	extracellular	92.93	93.96
Zm00001d033174_P001	Maize	plasma membrane	92.12	93.13
Zm00001d013751_P005	Maize	plastid	91.85	92.86
EER91258	Sorghum	cytosol	90.49	91.48
TraesCS4D01G151900.2	Wheat	cytosol, golgi	99.46	89.49
Solyc04g005340.2.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	85.87	88.52
PGSC0003DMT400004878	Potato	cytosol, extracellular	86.14	87.33
Solyc05g012070.2.1	Tomato	extracellular	85.6	87.02
TraesCS3A01G303200.1	Wheat	cytosol, extracellular, golgi	84.51	86.87
PGSC0003DMT400072896	Potato	cytosol, mitochondrion	84.78	86.19
TraesCS2A01G174400.1	Wheat	golgi	85.87	73.66
VIT_05s0020g03250.t01	Wine grape	cytosol	13.32	64.47
GSMUA_Achr2P13620_001	Banana	cytosol	35.05	60.85
TraesCS3A01G149600.1	Wheat	cytosol	18.75	57.5
TraesCS1A01G271600.1	Wheat	cytosol	22.01	54.0
TraesCS6A01G151900.1	Wheat	mitochondrion	15.22	48.28
TraesCS5A01G083800.1	Wheat	mitochondrion	14.95	47.41
TraesCS6A01G201200.1	Wheat	cytosol	14.95	47.41
TraesCS5A01G122800.1	Wheat	mitochondrion	14.67	46.55
TraesCS6A01G183500.1	Wheat	mitochondrion	14.4	46.09
TraesCS2A01G498600.1	Wheat	cytosol, unclear	41.85	44.25

Protein Annotations

EnsemblPlants:TraesCS4A01G166900.1	EnsemblPlantsGene:TraesCS4A01G166900	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0009987
GO:GO:0016866	GO:GO:0071669	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	InterPro:RGP	InterPro:RGP_fam
KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	PFAM:PF03214	PIRSF:PIRSF016429	SUPFAM:SSF53448
MapMan:3.13.7.3	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:409035572..409037654

Molecular Weight (calculated)

41503.9 Da

IEP (calculated)

5.739

GRAVY (calculated)

-0.164

Length

368 amino acids

Sequence
(BLAST)

001: MAGTVTVPGS SVPSTPLLKD ELDIVIPTIR NLDFLEMWRP FFQPYHLIIV QDGDPSKVIK VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYVFTID DDCFVAKDPS GKDINALEQH IKNLLSPSTP FFFNTLYDPY REGADFVRGY PFSLREGAPT AVSHGLWLNI PDYDAPTQMV KPRERNSRYV
201: DAVLTIPKGT LFPMCGMNLA FDRQLIGPAM YFGLMGDGQP IGRYDDMWAG WCVKVICDHL SLGVKTGLPY LWHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QNATLSKECD TVQKCYISLS EQVKEKLGKI DPYFVKLADA MVTWIEAWDE LNPSDTVVAA GNGKAAAM

Best Arabidopsis Sequence Match ( AT5G15650.1 )
(BLAST)

001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA

Arabidopsis Description

RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.