Factsheet for Os03t0599800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 17951457
extracellular: 18372294
extracellular: 19038476
extracellular: 21347307
extracellular: 24083427
nucleus: 24133045
extracellular: 26072143
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 24133045 doi

DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 17951457 doi

J Zhu, S Alvarez, EL Marsh, ME Lenoble, IJ Cho, M Sivaguru, S Chen, HT Nguyen, Y Wu, DP Schachtman, RE Sharp

Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211, USA.

msms PMID: 21347307 doi

L Zhou, SA Bokhari, CJ Dong, JY Liu

Laboratory of Molecular Biology, School of Life Sciences, Tsinghua University, Beijing, People's Republic of China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033174_P001	Maize	plasma membrane	93.41	93.41
TraesCS4A01G166900.1	Wheat	cytosol	93.96	92.93
TraesCS4B01G144900.1	Wheat	cytosol, extracellular, golgi, unclear	93.96	92.93
EER91258	Sorghum	cytosol	92.58	92.58
Zm00001d013751_P005	Maize	plastid	92.31	92.31
HORVU4Hr1G038960.2	Barley	cytosol, plasma membrane	93.96	92.18
Solyc04g005340.2.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	86.81	88.52
PGSC0003DMT400004878	Potato	cytosol, extracellular	86.81	87.05
Solyc05g012070.2.1	Tomato	extracellular	86.54	87.02
Os07t0604800-01	Rice	cytosol, plasma membrane	87.36	86.89
PGSC0003DMT400072896	Potato	cytosol, mitochondrion	85.44	85.91
TraesCS4D01G151900.2	Wheat	cytosol, golgi	93.96	83.62
VIT_05s0020g03250.t01	Wine grape	cytosol	13.74	65.79
GSMUA_Achr2P13620_001	Banana	cytosol	34.62	59.43
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	43.41	45.53

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EntrezGene:4333393	ProteinID:AAN08217.1	ProteinID:ABF97476.1	ProteinID:ABF97477.1
EMBL:AF294725	EMBL:AJ011078	EMBL:AK061813	EMBL:AK098933	ProteinID:BAF12531.1	ProteinID:BAS85190.1
ProteinID:EEE59464.1	EMBL:EU267966	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009832	GO:GO:0009987	GO:GO:0016043
GO:GO:0016853	GO:GO:0016866	GO:GO:0033356	GO:GO:0052691	GO:GO:0071555	GO:GO:0071669
EMBL:GQ848047	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	EnsemblPlantsGene:Os03g0599800	EnsemblPlants:Os03t0599800-01	PFAM:PF03214
PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	UniProt:Q8H8T0	InterPro:RGP	InterPro:RGP_fam
SUPFAM:SSF53448	UniParc:UPI0000056093	RefSeq:XP_015631326.1	:	:	:

Description

UDP-ARABINOPYRANOSE MUTASE 1Reversibly glycosylated polypeptide. (Os03t0599800-01)

Coordinates

chr3:-:22381361..22383926

Molecular Weight (calculated)

41350.8 Da

IEP (calculated)

6.062

GRAVY (calculated)

-0.225

Length

364 amino acids

Sequence
(BLAST)

001: MAGTVTVPSA SVPSTPLLKD ELDIVIPTIR NLDFLEMWRP FFQPYHLIIV QDGDPTKTIR VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYVFTID DDCFVAKDPS GKDINALEQH IKNLLSPSTP FFFNTLYDPY REGADFVRGY PFSLREGAKT AVSHGLWLNI PDYDAPTQMV KPRERNSRYV
201: DAVMTVPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCMKVICDHL SLGVKTGLPY IWHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QNATIPKECD TVQKCYLSLA EQVREKLGKI DPYFVKLADA MVTWIEAWDE LNPSTAAVEN GKAK

Best Arabidopsis Sequence Match ( AT5G15650.1 )
(BLAST)

001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA

Arabidopsis Description

RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.