CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033174_P001	Maize	plasma membrane	96.7	96.7
Zm00001d013751_P005	Maize	plastid	95.6	95.6
Os03t0599800-01	Rice	extracellular	92.58	92.58
TraesCS4B01G144900.1	Wheat	cytosol, extracellular, golgi, unclear	92.03	91.03
TraesCS4A01G166900.1	Wheat	cytosol	91.48	90.49
HORVU4Hr1G038960.2	Barley	cytosol, plasma membrane	90.93	89.22
EES03655	Sorghum	cytosol	86.26	88.95
Solyc04g005340.2.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	86.54	88.24
PGSC0003DMT400004878	Potato	cytosol, extracellular	87.09	87.33
Solyc05g012070.2.1	Tomato	extracellular	85.99	86.46
PGSC0003DMT400072896	Potato	cytosol, mitochondrion	85.16	85.64
EER97509	Sorghum	cytosol	84.07	84.76
TraesCS4D01G151900.2	Wheat	cytosol, golgi	91.76	81.66
VIT_05s0020g03250.t01	Wine grape	cytosol	13.46	64.47
GSMUA_Achr2P13620_001	Banana	cytosol	34.34	58.96
EES11595	Sorghum	cytosol	44.23	46.26

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EntrezGene:8062976	UniProt:C5WT90	EnsemblPlants:EER91258	ProteinID:EER91258
ProteinID:EER91258.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0005975	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009832	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
GO:GO:0033356	GO:GO:0052691	GO:GO:0071669	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF03214
PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	InterPro:RGP	InterPro:RGP_fam	EnsemblPlantsGene:SORBI_3001G173300
SUPFAM:SSF53448	unigene:Sbi.14234	UniParc:UPI0001A8222D	RefSeq:XP_002464260.1	:	:

Description

hypothetical protein

Coordinates

chr1:+:14551494..14554066

Molecular Weight (calculated)

41422.8 Da

IEP (calculated)

5.701

GRAVY (calculated)

-0.230

Length

364 amino acids

Sequence
(BLAST)

001: MAGTVTVPGA SVPSTPLLKD ELDIVIPTIR NLDFLEMWRP FFQPYHLIIV QDGDPTKTIK VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIYTID DDCFVAKDPT GKDINALEQH IKNIMSPSTP FFFNTLYDPY REGADFVRGY PFSLREGTHT AVSHGLWLNI PDYDAPTQLV KPKERNERYV
201: DAVMTIPKGT LFPMCGMNLC FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCVKVICDHL SLGVKTGLPY IWHSKASNPF VNLRKEYKGI FWQEDIIPFF
301: QNVTIPKDCD TVQKCYIYLS GQVKEKLGTI DPYFVKLADA MVTWIEAWDE LNPATPATEN GKAK

Best Arabidopsis Sequence Match ( AT5G15650.1 )
(BLAST)

001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA

Arabidopsis Description

RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.