CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G333100.1	Wheat	cytosol, golgi	91.22	90.45
HORVU3Hr1G073780.1	Barley	cytosol	90.93	90.17
TraesCS3D01G298600.1	Wheat	cytosol, unclear	90.65	90.14
TraesCS3A01G303200.1	Wheat	cytosol, extracellular, golgi	90.65	89.39
EER91258	Sorghum	cytosol	88.95	86.26
Solyc04g005340.2.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	86.97	85.99
Solyc05g012070.2.1	Tomato	extracellular	88.1	85.91
PGSC0003DMT400072896	Potato	cytosol, mitochondrion	87.25	85.08
PGSC0003DMT400004878	Potato	cytosol, extracellular	86.97	84.57
EER97509	Sorghum	cytosol	86.4	84.49
VIT_05s0020g03250.t01	Wine grape	cytosol	13.31	61.84
GSMUA_Achr2P13620_001	Banana	cytosol	33.14	55.19
EES11595	Sorghum	cytosol	47.03	47.7

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EntrezGene:8079235	UniProt:C5XKU8	EnsemblPlants:EES03655	ProteinID:EES03655
ProteinID:EES03655.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0005975	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009832	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
GO:GO:0033356	GO:GO:0052691	GO:GO:0071669	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF03214
PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF8	InterPro:RGP	InterPro:RGP_fam	EnsemblPlantsGene:SORBI_3003G304600
SUPFAM:SSF53448	unigene:Sbi.17588	UniParc:UPI0001A84DE0	RefSeq:XP_002458535.1	:	:

Description

hypothetical protein

Coordinates

chr3:-:63484536..63486229

Molecular Weight (calculated)

39931.3 Da

IEP (calculated)

6.963

GRAVY (calculated)

-0.177

Length

353 amino acids

Sequence
(BLAST)

001: MAPPLKDELD IVIPTIRNLD FLEMWRPFFQ PYHLIIVQDG DPAKTIKVPE GFDYELYNRN DINKILGPRA SCISFKDSAC RCFGYMVSKK KYIYTIDDDC
101: FVAKDPTGKD IDALAQHIKN LLCPSTPLFF NTLYDPYAPG ADFVRGYPFS LREGVPTAVS HGLWLNIPDY DAPTQLVKPR ERNERYVNAV MTIPKGTLFP
201: MCGMNLAFDR DLIGPAMYFG LMGDGQPIGR YDDMWAGWCV KVICDHLGLG VKTGLPYIWH SKASNPFVNL KKEYKGIFWQ EDIIPFFQAV VLPKDCDTVQ
301: KCYIALSQQV KEKLGKVDPY FTKLADAMVT WIEAWDSLNS SGGTAVANGK PKK

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.