CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022085_P001	Maize	cytosol, plastid	98.61	98.61
TraesCS2B01G200900.1	Wheat	cytosol	92.52	92.78
Os07t0604800-01	Rice	cytosol, plasma membrane	93.07	91.8
GSMUA_AchrUn_...	Banana	cytosol	65.37	91.12
GSMUA_Achr6P35020_001	Banana	cytosol	66.2	89.18
GSMUA_Achr4P23520_001	Banana	cytosol	65.37	87.41
Zm00001d006820_P001	Maize	cytosol	88.64	87.19
GSMUA_Achr10P...	Banana	cytosol	79.78	86.75
HORVU2Hr1G033100.1	Barley	cytosol, golgi, mitochondrion	91.97	86.68
EES03655	Sorghum	cytosol	84.49	86.4
KRH70960	Soybean	endoplasmic reticulum	87.81	86.14
KRH75101	Soybean	endoplasmic reticulum	87.81	86.14
EER91258	Sorghum	cytosol	84.76	84.07
TraesCS2A01G174400.1	Wheat	golgi	91.97	77.39
TraesCS2D01G181700.1	Wheat	golgi	92.24	77.26
EES11595	Sorghum	cytosol	45.71	47.41

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EntrezGene:8079021	UniProt:C5XDW6	EnsemblPlants:EER97509	ProteinID:EER97509
ProteinID:EER97509.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0005975	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009832	GO:GO:0009987	GO:GO:0016866
GO:GO:0030244	GO:GO:0033356	GO:GO:0052691	GO:GO:0071669	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	InterPro:RGP	InterPro:RGP_fam
EnsemblPlantsGene:SORBI_3002G368600	SUPFAM:SSF53448	unigene:Sbi.20424	UniParc:UPI0001A838B1	RefSeq:XP_002460988.1	:

Description

hypothetical protein

Coordinates

chr2:+:72814868..72818387

Molecular Weight (calculated)

40863.3 Da

IEP (calculated)

7.072

GRAVY (calculated)

-0.248

Length

361 amino acids

Sequence
(BLAST)

001: MASGSHAPVP LLKDELDIVI PTIRNLDFLE MWRPFFQPYH LIIVQDGDPS KTIRVPEGFD YELYNRNDIN RMLGPKASCI SFKDSACRCF GYMVSKKKYI
101: YTIDDDCFVA KDPSGKDINA LEQHIKNLLS PSTPFFFNTL YDPYRVGADF VRGYPFSLRE GVPTAVSHGL WLNIPDYDAP TQLVKPLERN TRYVDAILTI
201: PKGTLFPMCG MNLAFDRELI GPAMYFGLMG DGQPIGRYDD MWAGWCTKVI TDHLGLGVKT GLPYIWHSKA SNPFVNLKKE YNGIFWQEEL IPFFQSVSLP
301: KEATTVQKCY LELAKQVRAK LGKVDGYFNK LADSMVTWIE AWDELNPPKG GAPTANGPPK K

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.