Factsheet for HORVU2Hr1G033100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G200900.1	Wheat	cytosol	91.91	97.78
Zm00001d022085_P001	Maize	cytosol, plastid	86.95	92.24
EER97509	Sorghum	cytosol	86.68	91.97
GSMUA_AchrUn_...	Banana	cytosol	61.62	91.12
Os07t0604800-01	Rice	cytosol, plasma membrane	86.42	90.44
GSMUA_Achr4P23520_001	Banana	cytosol	62.4	88.52
GSMUA_Achr6P35020_001	Banana	cytosol	61.36	87.69
KRH75101	Soybean	endoplasmic reticulum	83.55	86.96
TraesCS2A01G174400.1	Wheat	golgi	96.34	86.01
TraesCS2D01G181700.1	Wheat	golgi	96.61	85.85
GSMUA_Achr10P...	Banana	cytosol	74.15	85.54
KRH70960	Soybean	endoplasmic reticulum	81.98	85.33
HORVU4Hr1G038960.2	Barley	cytosol, plasma membrane	81.98	84.64
HORVU3Hr1G073780.1	Barley	cytosol	78.33	84.27
Zm00001d006820_P001	Maize	cytosol	79.37	82.83
HORVU2Hr1G111070.2	Barley	cytosol	40.47	44.54

Protein Annotations

EnsemblPlants:HORVU2Hr1G033100.1	EnsemblPlantsGene:HORVU2Hr1G033100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0009987
GO:GO:0016866	GO:GO:0071669	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	InterPro:RGP	InterPro:RGP_fam
KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	PFAM:PF03214	PIRSF:PIRSF016429	SUPFAM:SSF53448
UniParc:UPI000B484506	UniProt:A0A287HMM0	MapMan:3.13.7.3	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:131211312..131214682

Molecular Weight (calculated)

43149.1 Da

IEP (calculated)

7.374

GRAVY (calculated)

-0.180

Length

383 amino acids

Sequence
(BLAST)

001: HLSAPRPITA CPSVTCLPRL AAMAAAPSTP LLKDELDIVI PTIRNLDFLE MWRPFFQPYH LIIVQDGDPT KVIKVPEGFD YELYNRNDVN RILGPKASCI
101: SFKDSACRCF GYMVSKKKYI YTIDDDCFVA KDPSGKDINA LEQHIKNLLS PSTPFFFNTL YDPYREGADF VRGYPFSLRE GAPTAVSHGL WLNIPDYDAP
201: TQLVKPLERN NRYVDAVLTI PKGTLFPMCG MNLAFDRELI GPAMYFGLMG DGQPIGRYDD MWAGWCTKVI TDHLSLGIKT GLPYIWHSKA SNPFVNLKKE
301: YNGIFWQEEL IPFFQSVTLS KEATTVQKCY LELAKQVKAK LGKVDGYFNK LADAMVTWIE AWDELNPPKG AITTTNSPAV KSK

Best Arabidopsis Sequence Match ( AT5G15650.1 )
(BLAST)

001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA

Arabidopsis Description

RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.