Factsheet for Os07t0604800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97509	Sorghum	cytosol	91.8	93.07
Zm00001d022085_P001	Maize	cytosol, plastid	91.8	93.07
TraesCS2B01G200900.1	Wheat	cytosol	90.71	92.22
GSMUA_AchrUn_...	Banana	cytosol	63.39	89.58
GSMUA_Achr6P35020_001	Banana	cytosol	65.03	88.81
Os03t0599800-01	Rice	extracellular	86.89	87.36
GSMUA_Achr4P23520_001	Banana	cytosol	63.93	86.67
HORVU2Hr1G033100.1	Barley	cytosol, golgi, mitochondrion	90.44	86.42
KRH75101	Soybean	endoplasmic reticulum	85.79	85.33
KRH70960	Soybean	endoplasmic reticulum	85.52	85.05
GSMUA_Achr10P...	Banana	cytosol	77.05	84.94
Zm00001d006820_P001	Maize	cytosol	83.88	83.65
TraesCS2A01G174400.1	Wheat	golgi	90.44	77.16
TraesCS2D01G181700.1	Wheat	golgi	90.71	77.03
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	42.62	44.96

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EntrezGene:4343849	EMBL:AK061294	ProteinID:BAC83877.1	ProteinID:BAF22138.1
ProteinID:BAT02557.1	ProteinID:EAZ40585.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009832	GO:GO:0009987	GO:GO:0016043
GO:GO:0016853	GO:GO:0016866	GO:GO:0033356	GO:GO:0052691	GO:GO:0071555	GO:GO:0071669
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	EnsemblPlantsGene:Os07g0604800	EnsemblPlants:Os07t0604800-01	PFAM:PF03214	PIRSF:PIRSF016429
PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	UniProt:Q6Z4G3	InterPro:RGP	InterPro:RGP_fam	SUPFAM:SSF53448
UniParc:UPI00001BF4AC	RefSeq:XP_015647980.1	SEG:seg	:	:	:

Description

UDP-ARABINOPYRANOSE MUTASE 3UDP-arabinopyranose mutase, Pollen wall morphogenesis (Os07t0604800-01)

Coordinates

chr7:+:24773276..24776519

Molecular Weight (calculated)

41281.5 Da

IEP (calculated)

6.366

GRAVY (calculated)

-0.265

Length

366 amino acids

Sequence
(BLAST)

001: MASSDAAAAQ AATPLLKDEL DIVIPTIRNL DFLEMWRPFF QPYHLIIVQD GDPKKTIRVP EGFDYELYNR DDINRILGPR ASCISFKDSA CRCFGYMVSK
101: KKYIYTIDDD CFVAKDPSGK DINALEQHIK NLLNPSTPFF FNTLYDPYRD GADFVRGYPF SLREGAPTAV SHGLWLNIPD YDAPTQLVKP LERNSRYVDA
201: VMTIPKGTLF PMCGMNLAFD RDLIGPAMYF GLMGDGQPIG RYDDMWAGWC TKVITDHLGL GVKTGLPYIW HSKASNPFVN LKKEYNGIFW QEELIPFFQS
301: ASLPKEADTV QKCYLELAKQ VRAKLGKVDG YFNKLADSMV TWIEAWDQLN PPKGAVATAN GTAKSK

Best Arabidopsis Sequence Match ( AT3G08900.1 )
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN

Arabidopsis Description

RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.