Factsheet for GSMUA_Achr4P23520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	89.63	93.44
GSMUA_Achr4P32910_001	Banana	cytosol	92.59	92.59
GSMUA_Achr6P35020_001	Banana	cytosol	91.48	92.16
GSMUA_Achr2P13630_001	Banana	cytosol	43.33	84.17
GSMUA_Achr3P25300_001	Banana	cytosol	85.56	80.21
GSMUA_Achr10P...	Banana	cytosol	88.52	71.99
TraesCS2B01G200900.1	Wheat	cytosol	89.63	67.22
GSMUA_Achr4P14450_001	Banana	cytosol	81.85	67.17
KRH75101	Soybean	endoplasmic reticulum	89.26	65.49
EER97509	Sorghum	cytosol	87.41	65.37
Zm00001d022085_P001	Maize	cytosol, plastid	87.04	65.1
KRH70960	Soybean	endoplasmic reticulum	88.52	64.95
Os07t0604800-01	Rice	cytosol, plasma membrane	86.67	63.93
GSMUA_Achr8P28120_001	Banana	cytosol	87.04	63.17
HORVU2Hr1G033100.1	Barley	cytosol, golgi, mitochondrion	88.52	62.4
GSMUA_Achr7P00470_001	Banana	cytosol	78.15	61.34
Zm00001d006820_P001	Maize	cytosol	79.26	58.31
TraesCS2A01G174400.1	Wheat	golgi	89.63	56.41
TraesCS2D01G181700.1	Wheat	golgi	89.63	56.15
GSMUA_Achr2P13620_001	Banana	cytosol	16.3	20.75

Protein Annotations

EnsemblPlants:GSMUA_Achr4P23520_001	EnsemblPlants:GSMUA_Achr4T23520_001	EnsemblPlantsGene:GSMUA_Achr4G23520_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	PFAM:PF03214	UniParc:UPI000296D455
UniProt:M0SRG3	MapMan:3.13.7.3	:	:	:	:

Description

Alpha-1,4-glucan-protein synthase [UDP-forming] 2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G23520_001]

Coordinates

chr4:+:23563694..23566245

Molecular Weight (calculated)

30656.0 Da

IEP (calculated)

7.807

GRAVY (calculated)

-0.295

Length

270 amino acids

Sequence
(BLAST)

001: MVSKKKYIYT IDDDCFVAKD PTGKEINALE QHIKNLLSPA TPHFFNTLYD PYREGADFVR GYPFSLREGA RTAVSHGLWL NIPDYDAPTQ LVKPRERNTR
101: YVDAVLTIPK GTLFPMCGMN LAFDRELIGP AMYFGLMGDG QPIGRYDDMW AGWCTKVICD HLGLGIKTGL PYIWHSKASN PFVNLKKEYK GIFWQEELIP
201: FFQSAVLSKE CTTVQKCYIE LSKQVREKLG KIDPYFTKLA DAMVTWIEAW DDLNPPKVAA EVPNGPAKAK

Best Arabidopsis Sequence Match ( AT3G08900.1 )
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN

Arabidopsis Description

RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.