CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	89.37	89.63
TraesCS2B01G526700.1	Wheat	cytosol, golgi	89.08	89.08
HORVU2Hr1G111070.2	Barley	cytosol	89.08	89.08
TraesCS2D01G498900.1	Wheat	cytosol, golgi, unclear	88.51	88.51
TraesCS2A01G498600.1	Wheat	cytosol, unclear	88.51	88.51
Zm00001d001979_P002	Maize	extracellular, vacuole	95.11	78.25
VIT_04s0023g00110.t01	Wine grape	cytosol	63.79	62.18
AT5G16510.2	Thale cress	cytosol	61.78	61.78
Solyc04g051200.1.1	Tomato	cytosol, unclear	61.49	61.49
Bra008616.1-P	Field mustard	cytosol	61.21	61.21
CDX69446	Canola	cytosol	61.21	61.21
PGSC0003DMT400059506	Potato	cytosol	61.21	61.21
CDY55583	Canola	cytosol	60.92	60.92
CDX85502	Canola	cytosol	17.24	55.56
Bra006359.1-P	Field mustard	cytosol	16.67	55.24
Bra023571.1-P	Field mustard	cytosol	16.67	54.72
CDY38107	Canola	cytosol	24.14	53.85
CDX78695	Canola	cytosol	16.09	53.33
KRH40343	Soybean	cytosol, extracellular, plastid	62.36	50.82
KRH00886	Soybean	cytosol, peroxisome, plastid	62.07	50.59
EES03655	Sorghum	cytosol	47.7	47.03
GSMUA_Achr7P00470_001	Banana	cytosol	45.4	45.93
EER97509	Sorghum	cytosol	47.41	45.71
EER91258	Sorghum	cytosol	46.26	44.23

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	UniProt:C5Y9L6	EnsemblPlants:EES11595	ProteinID:EES11595	ProteinID:EES11595.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005829	GO:GO:0005975	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009628	GO:GO:0009651	GO:GO:0009832
GO:GO:0009987	GO:GO:0016866	GO:GO:0030244	GO:GO:0033356	GO:GO:0052691	GO:GO:0071669
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF4	InterPro:RGP	InterPro:RGP_fam
EnsemblPlantsGene:SORBI_3006G250900	unigene:Sbi.14941	UniParc:UPI0001A87245	RefSeq:XP_002447267.1	:	:

Description

hypothetical protein

Coordinates

chr6:+:58957245..58958628

Molecular Weight (calculated)

38824.8 Da

IEP (calculated)

6.622

GRAVY (calculated)

-0.091

Length

348 amino acids

Sequence
(BLAST)

001: MPLEIQDSEV DIVIAALQPN LTTFFEAWRP FFSRFHIIVV KDPDMAEDLQ IPTGFDLKVY TKSDINGVLG SSSINFSGHS CRYFGYLVSR KKYVISIDDN
101: CLPAKDTAGL TVDAVAQHMA NLKTPATPFF FNTLYDPYRK GADFVRGYPF SLREGVECML SCGLWMHNAD YDPMTHVVKR NQRNTTYVDA VMTVPLGAML
201: PVSGINVAFN RDVLGPAMFP GLRLRKEGKH RWDTLEDIWN GLCAKVVCDS LGYGVKTGLP YVMRSDAEAG KALESLKDWE GVKIMDDVLP FFQSLKLSRT
301: AVTVDDCVKE LAGIVREKLG PKNAIFTKAA DAMVEWNNLW KAHGAQNA

Best Arabidopsis Sequence Match ( AT5G16510.1 )
(BLAST)

001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA

Arabidopsis Description

RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.