Factsheet for Bra006359.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78695	Canola	cytosol	93.33	93.33
Bra023571.1-P	Field mustard	cytosol	83.81	83.02
Bra008616.1-P	Field mustard	cytosol	87.62	26.44
AT5G16510.2	Thale cress	cytosol	85.71	25.86
PGSC0003DMT400059506	Potato	cytosol	62.86	18.97
Solyc04g051200.1.1	Tomato	cytosol, unclear	61.9	18.68
EES11595	Sorghum	cytosol	55.24	16.67
VIT_04s0023g00110.t01	Wine grape	cytosol	56.19	16.53
TraesCS2B01G526700.1	Wheat	cytosol, golgi	52.38	15.8
HORVU2Hr1G111070.2	Barley	cytosol	52.38	15.8
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	51.43	15.56
TraesCS2A01G498600.1	Wheat	cytosol, unclear	51.43	15.52
TraesCS2D01G498900.1	Wheat	cytosol, golgi, unclear	50.48	15.23
KRH00886	Soybean	cytosol, peroxisome, plastid	61.9	15.22
KRH40343	Soybean	cytosol, extracellular, plastid	60.0	14.75
Zm00001d001979_P002	Maize	extracellular, vacuole	55.24	13.71
GSMUA_Achr7P00470_001	Banana	cytosol	42.86	13.08
Bra023530.1-P	Field mustard	cytosol, extracellular, peroxisome	41.9	12.9
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	43.81	12.89
Bra021473.1-P	Field mustard	cytosol	42.86	12.61
Bra001037.1-P	Field mustard	cytosol	42.86	12.61
Bra001338.1-P	Field mustard	cytosol	42.86	12.36
Bra008683.1-P	Field mustard	cytosol	41.9	12.32
Bra029728.1-P	Field mustard	cytosol	42.86	11.9
Bra006315.1-P	Field mustard	cytosol	40.0	11.57
Bra000628.1-P	Field mustard	cytosol	39.05	11.42

Protein Annotations

EnsemblPlants:Bra006359.1	EnsemblPlants:Bra006359.1-P	EnsemblPlantsGene:Bra006359	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF4	PFAM:PF03214	UniParc:UPI000253F602
UniProt:M4CQ70	MapMan:3.13.7.3	:	:	:	:

Description

AT5G16510 (E=2e-050) | reversibly glycosylated polypeptide, putative

Coordinates

chrA03:+:3159500..3159817

Molecular Weight (calculated)

11787.1 Da

IEP (calculated)

5.149

GRAVY (calculated)

-0.210

Length

105 amino acids

Sequence
(BLAST)

001: MCLKHISDHL GYGVKTGLPY VWRNERGDAV ESLRKKWEGV DLMEKNVPFF ESLKLPESAV KVEDCVLELA KAAREQLGSD VPAFTQAADA MVSWIQLWTY
101: VNSSG

Best Arabidopsis Sequence Match ( AT5G16510.1 )
(BLAST)

001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA

Arabidopsis Description

RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.