Factsheet for Bra023530.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

cytosol 2
golgi 2
peroxisome 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85541	Canola	peroxisome	99.41	99.41
CDX90981	Canola	cytosol, extracellular, peroxisome	99.41	99.41
AT5G15650.1	Thale cress	cytosol	96.48	91.39
Bra008683.1-P	Field mustard	cytosol	95.31	91.04
Bra006315.1-P	Field mustard	cytosol	96.77	90.91
Bra021473.1-P	Field mustard	cytosol	92.08	87.96
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	91.5	87.39
Bra001037.1-P	Field mustard	cytosol	91.2	87.11
Bra001338.1-P	Field mustard	cytosol	81.23	76.1
Bra029728.1-P	Field mustard	cytosol	80.65	72.75
Bra000628.1-P	Field mustard	cytosol	74.49	70.75
Bra008616.1-P	Field mustard	cytosol	43.7	42.82
Bra023571.1-P	Field mustard	cytosol	13.2	42.45
Bra006359.1-P	Field mustard	cytosol	12.9	41.9

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EnsemblPlantsGene:Bra023530	EnsemblPlants:Bra023530.1	EnsemblPlants:Bra023530.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016866	GO:GO:0030244	InterPro:IPR029044	UniProt:M4E427	InterPro:Nucleotide-diphossugar_trans	PFAM:PF03214
PANTHER:PTHR31682	PANTHER:PTHR31682:SF15	InterPro:RGP_fam	SUPFAM:SSF53448	UniParc:UPI00025436B6	SEG:seg

Description

AT5G15650 (E=4e-111) RGP2, ATRGP2 | RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups

Coordinates

chrA02:+:3804854..3806694

Molecular Weight (calculated)

38524.7 Da

IEP (calculated)

6.252

GRAVY (calculated)

-0.179

Length

341 amino acids

Sequence
(BLAST)

001: MVDPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPTKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMM
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FLREGVTTAV SHGLWLNIPD YDAPTQLVKP KERNTRYVDA VMTIPKGTLF PMCGMNLAFD
201: RDLIGPAMYF GLMGDGQPIG RYDDMWAGWC IKVICDHLGL GVKTGLPYIY HSKASNPFVN LKKEYKGIFW QEEIIPFFQN AKLSKEATTV QQCYIELSKM
301: VKEKLSSLDP YFDKLADAMV TWIEAWDELN PTAAAAANGK A

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.