Factsheet for Bra000628.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
golgi 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83155	Canola	cytosol	99.44	99.44
CDY34025	Canola	cytosol	99.44	99.44
AT5G50750.1	Thale cress	cytosol	96.1	94.78
Bra001037.1-P	Field mustard	cytosol	75.21	75.63
Bra008683.1-P	Field mustard	cytosol	75.21	75.63
Bra021473.1-P	Field mustard	cytosol	74.65	75.07
Bra006315.1-P	Field mustard	cytosol	75.77	74.93
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	74.37	74.79
VIT_17s0000g01290.t01	Wine grape	cytosol	76.88	74.59
Bra023530.1-P	Field mustard	cytosol, extracellular, peroxisome	70.75	74.49
Bra001338.1-P	Field mustard	cytosol	75.21	74.18
Bra029728.1-P	Field mustard	cytosol	73.54	69.84
Bra008616.1-P	Field mustard	cytosol	45.4	46.84
Bra023571.1-P	Field mustard	cytosol	11.98	40.57
Bra006359.1-P	Field mustard	cytosol	11.42	39.05

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EnsemblPlantsGene:Bra000628	EnsemblPlants:Bra000628.1	EnsemblPlants:Bra000628.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005829	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016866	GO:GO:0030244	GO:GO:0071669	InterPro:IPR029044	UniProt:M4C8V0
InterPro:Nucleotide-diphossugar_trans	PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF15	InterPro:RGP
InterPro:RGP_fam	SUPFAM:SSF53448	UniParc:UPI0002540203	:	:	:

Description

AT5G50750 (E=2e-209) RGP4 | RGP4 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 4); transferase, transferring hexosyl groups

Coordinates

chrA03:+:12134186..12135492

Molecular Weight (calculated)

41118.3 Da

IEP (calculated)

5.855

GRAVY (calculated)

-0.349

Length

359 amino acids

Sequence
(BLAST)

001: MAGYNLEAIE AAPLKEDVDI VIPTIRSLDF LEQWRPFLKH YHLIIVQDGD PSINIRVPEG YDYELYNRND INRILGPRAN CISYKDGGCR CFGFMVSKKK
101: YIYTIDDDCF VAKDPSGKEI NVIAQHIKNL ETPSTPHYFN TLYDPFRDGT DFVRGYPFSL REGVTTAISH GLWLNIPDYD APTQLVKPRE RNIRYVDAVM
201: TIPKGVLYPM CGMNLAFNRE LIGPAMYFGL MGEGQPISRY DDMWAGWAAK VVCDHLGFGV KTGLPYVWHS KASNPFVNLK KEHKGLHWQE DMVPFFQNLR
301: LSKESDTAAK CYMELSNMTK EKLTEVDPYF EKLADAMVAW IEAWEELNPP VDGKDVKAK

Best Arabidopsis Sequence Match ( AT5G50750.1 )
(BLAST)

001: MAGYNLEAIE AAPLKDDLDI VIPTIRSLDF LEQWRPFLHH YHLIIVQDGD PSIKIRVPEG YDYELYNRND INRILGPRAN CISYKDGGCR CFGFMVSKKK
101: YIYTIDDDCF VAKDPSGKDI NVIAQHIKNL ETPSTPHYFN TLYDPFRDGT DFVRGYPFSL REGVQTAISH GLWLNIPDYD APTQLVKPRE RNTRYVDAVM
201: TIPKRVLYPM CGMNLAFNRE LVGPAMYFGL MGEGQPISRY DDMWAGWAAK VVCDHLGFGV KTGLPYLWHS KASNPFVNLK KEHKGLHWQE DMVPFFQNLR
301: LSKESDTAAK CYMEISNMTK EKLTKVDPYF EKLADAMVVW IEAWEELNPP VKKKQSDGKD VKAK

Arabidopsis Description

RGP4Probable UDP-arabinopyranose mutase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.