Factsheet for Bra006315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
golgi 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78646	Canola	plasma membrane	92.84	98.83
Bra008683.1-P	Field mustard	cytosol	96.14	97.76
CDX70629	Canola	peroxisome	91.46	97.36
Bra023530.1-P	Field mustard	cytosol, extracellular, peroxisome	90.91	96.77
AT5G15650.1	Thale cress	cytosol	95.32	96.11
Bra021473.1-P	Field mustard	cytosol	92.29	93.84
Bra001037.1-P	Field mustard	cytosol	92.01	93.56
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	92.01	93.56
Bra001338.1-P	Field mustard	cytosol	80.99	80.77
Bra029728.1-P	Field mustard	cytosol	80.72	77.51
Bra000628.1-P	Field mustard	cytosol	74.93	75.77
Bra008616.1-P	Field mustard	cytosol	46.83	48.85
Bra023571.1-P	Field mustard	cytosol	11.85	40.57
Bra006359.1-P	Field mustard	cytosol	11.57	40.0

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EnsemblPlantsGene:Bra006315	EnsemblPlants:Bra006315.1	EnsemblPlants:Bra006315.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016866	GO:GO:0030244	GO:GO:0071669	InterPro:IPR029044	UniProt:M4CQ26	InterPro:Nucleotide-diphossugar_trans
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF15	InterPro:RGP	InterPro:RGP_fam
SUPFAM:SSF53448	UniParc:UPI000253FC28	SEG:seg	:	:	:

Description

AT5G15650 (E=4e-208) RGP2, ATRGP2 | RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups

Coordinates

chrA03:+:2969258..2971015

Molecular Weight (calculated)

41055.6 Da

IEP (calculated)

5.984

GRAVY (calculated)

-0.164

Length

363 amino acids

Sequence
(BLAST)

001: MVDPANTVGI PVNPTPLLKD ELDIVIPTIR SLDFLEMWRP FLQPYHLIIV QDGDPTKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP LFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASTPF VNLKKEYKGI FWQEDIIPFF
301: QNVKLSKEAT TVQQCYIELS KMVKEKLSPL DPYFDKLADA MVTWIEAWDE LTPPAAAAAN GKA

Best Arabidopsis Sequence Match ( AT5G15650.1 )
(BLAST)

001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA

Arabidopsis Description

RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.