Factsheet for TraesCS2D01G498900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, unclear
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G526700.1	Wheat	cytosol, golgi	98.56	98.56
TraesCS2A01G498600.1	Wheat	cytosol, unclear	98.28	98.28
HORVU2Hr1G111070.2	Barley	cytosol	97.7	97.7
EES11595	Sorghum	cytosol	88.51	88.51
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	87.64	87.9
Zm00001d001979_P002	Maize	extracellular, vacuole	87.36	71.87
VIT_04s0023g00110.t01	Wine grape	cytosol	62.93	61.34
Bra008616.1-P	Field mustard	cytosol	61.21	61.21
CDX69446	Canola	cytosol	61.21	61.21
CDY55583	Canola	cytosol	61.21	61.21
AT5G16510.2	Thale cress	cytosol	60.06	60.06
PGSC0003DMT400059506	Potato	cytosol	59.2	59.2
Solyc04g051200.1.1	Tomato	cytosol, unclear	59.2	59.2
CDX85502	Canola	cytosol	16.38	52.78
Bra023571.1-P	Field mustard	cytosol	15.8	51.89
CDY38107	Canola	cytosol	22.7	50.64
Bra006359.1-P	Field mustard	cytosol	15.23	50.48
KRH40343	Soybean	cytosol, extracellular, plastid	60.63	49.41
KRH00886	Soybean	cytosol, peroxisome, plastid	60.63	49.41
CDX78695	Canola	cytosol	14.66	48.57
TraesCS3D01G298600.1	Wheat	cytosol, unclear	45.11	44.23
GSMUA_Achr7P00470_001	Banana	cytosol	43.39	43.9
TraesCS4D01G151900.2	Wheat	cytosol, golgi	44.25	37.65
TraesCS2D01G181700.1	Wheat	golgi	43.97	35.5
TraesCS2D01G553900.1	Wheat	cytosol	6.9	23.76

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150
GO:GO:0009506	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016866	GO:GO:0071669
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF4	InterPro:RGP	InterPro:RGP_fam
EnsemblPlantsGene:TraesCS2D01G498900	EnsemblPlants:TraesCS2D01G498900.1	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:594101445..594102583

Molecular Weight (calculated)

38868.9 Da

IEP (calculated)

6.622

GRAVY (calculated)

-0.064

Length

348 amino acids

Sequence
(BLAST)

001: MSLEVHDSEV DIVIAALQPN LTSFFQAWQP FFSRFDIIVV KDPELAADLQ IPSGFNVKVY TKSDIDGLLG ATTINFSGHS CRYFGYLVSR KKYVISIDDN
101: CLPAKDPAGM TVDAVTQHMI NLKTPATPFF FNTLYDPYRK GADFVRGYPF SLREGVECML SCGLWLHNAD YDPMTHVVKR NQRNTNYVDA VMTVPLGAMF
201: PVSGINVAFN REVLGPVMFP GLRIRKEGKH RWDTLEDIWN GLCAKVVCDS LGYGVKTGLP YVMRSDAEAG KALESLKEWE GVKVMDDVLP FFESLKLSRT
301: AVTVDDCVKE LAGIVKQKLA PKNAIFAKAA DVMEEWTKLW KSHGAQNA

Best Arabidopsis Sequence Match ( AT5G16510.1 )
(BLAST)

001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA

Arabidopsis Description

RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.