CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40343	Soybean	cytosol, extracellular, plastid	95.08	95.08
VIT_04s0023g00110.t01	Wine grape	cytosol	60.89	72.83
CDY55583	Canola	cytosol	59.02	72.41
Bra008616.1-P	Field mustard	cytosol	58.78	72.13
CDX69446	Canola	cytosol	58.78	72.13
AT5G16510.2	Thale cress	cytosol	58.78	72.13
PGSC0003DMT400059506	Potato	cytosol	58.31	71.55
Solyc04g051200.1.1	Tomato	cytosol, unclear	57.85	70.98
Bra023571.1-P	Field mustard	cytosol	16.16	65.09
CDX85502	Canola	cytosol	16.39	64.81
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	51.52	63.4
EES11595	Sorghum	cytosol	50.59	62.07
Bra006359.1-P	Field mustard	cytosol	15.22	61.9
HORVU2Hr1G111070.2	Barley	cytosol	50.12	61.49
TraesCS2B01G526700.1	Wheat	cytosol, golgi	49.88	61.21
CDY38107	Canola	cytosol	22.25	60.9
Zm00001d001979_P002	Maize	extracellular, vacuole	60.19	60.76
TraesCS2A01G498600.1	Wheat	cytosol, unclear	49.41	60.63
TraesCS2D01G498900.1	Wheat	cytosol, golgi, unclear	49.41	60.63
CDX78695	Canola	cytosol	14.75	60.0
GSMUA_Achr7P00470_001	Banana	cytosol	39.58	49.13
KRH54738	Soybean	cytosol, endoplasmic reticulum	39.58	46.69
KRH63176	Soybean	endoplasmic reticulum	39.58	46.43
KRH01363	Soybean	endoplasmic reticulum, nucleus	38.17	46.18
KRH45087	Soybean	endoplasmic reticulum	37.7	45.61
KRH75101	Soybean	endoplasmic reticulum	38.41	44.57
KRH18345	Soybean	endoplasmic reticulum, nucleus	37.0	44.26
KRH70960	Soybean	endoplasmic reticulum	37.94	44.02
KRG93690	Soybean	cytosol, endoplasmic reticulum	36.53	43.7

Protein Annotations

EMBL:ACUP02011481	EnsemblPlants:KRH00886	EnsemblPlantsGene:GLYMA_18G240100	EntrezGene:100797033	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866
GO:GO:0030244	InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF4	PFAM:PF03214
ProteinID:KRH00886	ProteinID:KRH00886.1	UniParc:UPI0006EDC3FD	UniProt:A0A0R0F492	MapMan:3.13.7.3	:

Description

hypothetical protein

Coordinates

chr18:-:52884832..52887197

Molecular Weight (calculated)

47589.0 Da

IEP (calculated)

5.954

GRAVY (calculated)

0.140

Length

427 amino acids

Sequence
(BLAST)

001: MRTKTPPSLL SLTIDSAVLN LPDISDLSHI PDHILLDLFL RILKAGKLTE KVLRLFIATG KDEVLSFVQA LNIQHILTPV LPTTVINENE VDIVIGALHS
101: DLTTFMNEWK PIFSRFHLII IKDPDLKEEL RIPEGFSVDV YTKSEIERVV GSSTSVRFSG YSCRYFGFLI SRKKYVVCID DDCVPAKDNL GILVDAVAQH
201: IVNLQTPATP FFFNTLYDPF CKGADFVRGY PFSLRSGVDC ALSCGLWLNL ADLDAPTQAL KPGQRNLRYV DAVVTVPSRA MVPVSGINIA FNREVVGPAL
301: VPALRLAGEG KLRWETMEDI WCGMCVKVIC DHLGLGVKSG LPYVWRTERG DAIQSLKKEW EGVKLMEDVV PFFQSLRLPQ SATTAEDCVV EMAKTVKEQL
401: GKVDPMFSAA AEAMEEWVKL WKSVRSV

Best Arabidopsis Sequence Match ( AT5G16510.1 )
(BLAST)

001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA

Arabidopsis Description

RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.