Factsheet for Zm00001d001979_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11595	Sorghum	cytosol	78.25	95.11
TraesCS2A01G498600.1	Wheat	cytosol, unclear	72.34	87.93
TraesCS2B01G526700.1	Wheat	cytosol, golgi	72.34	87.93
HORVU2Hr1G111070.2	Barley	cytosol	72.1	87.64
TraesCS2D01G498900.1	Wheat	cytosol, golgi, unclear	71.87	87.36
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	71.63	87.32
AT5G16510.2	Thale cress	cytosol	50.12	60.92
Solyc04g051200.1.1	Tomato	cytosol, unclear	50.12	60.92
PGSC0003DMT400059506	Potato	cytosol	50.12	60.92
VIT_04s0023g00110.t01	Wine grape	cytosol	51.3	60.78
CDX69446	Canola	cytosol	49.65	60.34
Bra008616.1-P	Field mustard	cytosol	49.65	60.34
KRH00886	Soybean	cytosol, peroxisome, plastid	60.76	60.19
KRH40343	Soybean	cytosol, extracellular, plastid	60.76	60.19
CDY55583	Canola	cytosol	49.41	60.06
CDX85502	Canola	cytosol	14.18	55.56
Bra006359.1-P	Field mustard	cytosol	13.71	55.24
Bra023571.1-P	Field mustard	cytosol	13.71	54.72
CDY38107	Canola	cytosol	19.86	53.85
CDX78695	Canola	cytosol	13.24	53.33
GSMUA_Achr7P00470_001	Banana	cytosol	37.59	46.22
Zm00001d022085_P001	Maize	cytosol, plastid	38.77	45.43
Zm00001d013751_P005	Maize	plastid	38.3	44.51
Zm00001d033174_P001	Maize	plasma membrane	38.3	44.51
Zm00001d006820_P001	Maize	cytosol	35.7	41.14
Zm00001d042881_P001	Maize	extracellular	4.73	29.41
Zm00001d014000_P001	Maize	plastid	18.68	26.78
Zm00001d012683_P001	Maize	cytosol, nucleus, peroxisome	18.91	23.81

Protein Annotations

KEGG:00520+5.4.99.30	EntrezGene:100285211	MapMan:3.13.7.3	UniProt:A0A1D6DVD2	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829
GO:GO:0005975	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506
GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244	ProteinID:ONM12689.1
PFAM:PF03214	PANTHER:PTHR31682	PANTHER:PTHR31682:SF4	InterPro:RGP_fam	UniParc:UPI00084342DD	EnsemblPlantsGene:Zm00001d001979
EnsemblPlants:Zm00001d001979_P002	EnsemblPlants:Zm00001d001979_T002	SEG:seg	:	:	:

Description

Probable UDP-arabinopyranose mutase 5

Coordinates

chr2:-:3824254..3826568

Molecular Weight (calculated)

46962.0 Da

IEP (calculated)

7.222

GRAVY (calculated)

0.047

Length

423 amino acids

Sequence
(BLAST)

001: MRPPSLLSLT LDAALLRIAN IADLSHLPDH LLIDLFRRTL SAGKLTEKVL KLFLATDCED IILAVRLLNI KQPLVPVLPT NSEVDIVIAA LQPNLTTFFE
101: AWRPFFSRFH IIVVKDPDMA EDLQIPAGFD LKVYTKSDIN GLLGASSSIN LSGHSCRYFG YLVSRKKYVI SIDDNCLPAK DTAGSTVDVV AQHMANLKTP
201: ATPFFFNTLY DPYRKGADFV RGYPFSLREG VECMLSCGLW LHNADYDPMT HVVKRNQRNT TYVDAVMTVP LGAMLPVSGI NVAFNRDVLG PAMFPGLRLR
301: NEGKHRWDTL EDIWNGLCAK VVCDSLGYGV KTGLPYVMRS DAEAGKALES LKEWEGVKVM DDVLPFFQSL KLSRTAVTVD DCVKELAGVV REKLGPKNAI
401: FTKAADAMVE WNNLWKVHGA QNA

Best Arabidopsis Sequence Match ( AT5G16510.1 )
(BLAST)

001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA

Arabidopsis Description

RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.