Factsheet for Zm00001d012683_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73947	Canola	cytosol	37.5	73.26
GSMUA_Achr2P13630_001	Banana	cytosol	28.87	69.78
VIT_13s0106g00180.t01	Wine grape	cytosol	12.8	53.09
Zm00001d042881_P001	Maize	extracellular	10.42	51.47
Zm00001d033174_P001	Maize	plasma membrane	48.81	45.05
Zm00001d013751_P005	Maize	plastid	48.21	44.51
Solyc03g114860.2.1	Tomato	cytosol, extracellular, unclear	46.13	44.16
KRH54738	Soybean	cytosol, endoplasmic reticulum	47.32	43.92
Zm00001d022085_P001	Maize	cytosol, plastid	46.73	43.49
KRH63176	Soybean	endoplasmic reticulum	47.02	43.41
PGSC0003DMT400063316	Potato	cytosol	46.43	42.74
Zm00001d006820_P001	Maize	cytosol	41.67	38.15
Zm00001d001979_P002	Maize	extracellular, vacuole	23.81	18.91
Zm00001d014000_P001	Maize	plastid	13.39	15.25

Protein Annotations

EnsemblPlants:Zm00001d012683_P001	EnsemblPlants:Zm00001d012683_T001	EnsemblPlantsGene:Zm00001d012683	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF8	PFAM:PF03214	ProteinID:AQL00288.1
UniParc:UPI00022078C0	UniProt:K7W4C7	MapMan:3.13.7.3	:	:	:

Description

UDP-arabinopyranose mutase 3

Coordinates

chr8:+:178610642..178614771

Molecular Weight (calculated)

37622.8 Da

IEP (calculated)

9.261

GRAVY (calculated)

-0.225

Length

336 amino acids

Sequence
(BLAST)

001: MLPKQHQAAS VMSCREQSSA TGPKGTLFPM CGMNLAFDRD LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHLGLGV KTGLPYIWHS KASNPFVNLK
101: KEYKGIFSQE DTIPFFQVCG LIRLLMQKQE AKWNKYNNSS SISSATGPKG TLFPMCGMNL AFDRDLIGPA MYFGLMGDGQ PIGRYDDMWA GWCVKVICDH
201: LGLGVKTGLP YIWHSKASNP FVNLKKEYKG IFWQEDTIPF FQAVVLPKDC DIALSQQVKE KLGKQRRISV MGSWGHGSTR EEKYISTLLN YSGPLFYSVK
301: EKLGKVDPYF TKLADAMVTW IKAWDSLNAA NGKPKK

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.