CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13630_001	Banana	cytosol	59.3	73.38
CDY00647	Canola	cytosol	97.09	57.19
CDY64941	Canola	cytosol	93.6	46.94
CDY27965	Canola	cytosol	6.98	46.15
CDX78695	Canola	cytosol	27.91	45.71
CDX85502	Canola	cytosol	27.91	44.44
CDX70629	Canola	peroxisome	80.81	40.76
CDX85541	Canola	peroxisome	80.81	40.76
CDX90981	Canola	cytosol, extracellular, peroxisome	80.81	40.76
CDX69510	Canola	cytosol	79.07	40.6
CDY26446	Canola	cytosol	79.07	40.6
CDX78646	Canola	plasma membrane	80.23	40.47
Solyc03g114860.2.1	Tomato	cytosol, extracellular, unclear	81.4	39.89
PGSC0003DMT400063316	Potato	cytosol	84.3	39.73
CDY27964	Canola	cytosol	65.12	39.3
KRH54738	Soybean	cytosol, endoplasmic reticulum	81.98	38.95
CDX91983	Canola	cytosol	80.23	38.66
CDY43248	Canola	cytosol, extracellular, peroxisome	80.23	38.66
CDY60468	Canola	cytosol, extracellular, peroxisome	80.23	38.66
VIT_01s0011g00160.t01	Wine grape	cytosol	80.81	38.5
CDY34712	Canola	cytosol	79.65	38.38
CDX74267	Canola	cytosol	79.65	38.38
KRH63176	Soybean	endoplasmic reticulum	79.65	37.64
Zm00001d012683_P001	Maize	cytosol, nucleus, peroxisome	73.26	37.5
CDY34025	Canola	cytosol	71.51	34.26
CDX83155	Canola	cytosol	70.93	33.98
CDY55583	Canola	cytosol	43.6	21.55
CDX69446	Canola	cytosol	43.02	21.26
CDY38107	Canola	cytosol	19.19	21.15

Protein Annotations

EnsemblPlants:CDX73947	EnsemblPlantsGene:GSBRNA2T00111675001	GO:A0A078CAR4	InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682
PANTHER:PTHR31682:SF14	PFAM:PF03214	ProteinID:CDX73947	ProteinID:CDX73947.1	UniParc:UPI0004EF40AD	MapMan:3.13.7.3

Description

BnaA03g31000D

Coordinates

chrLK031800:-:656605..657819

Molecular Weight (calculated)

19490.7 Da

IEP (calculated)

5.003

GRAVY (calculated)

-0.152

Length

172 amino acids

Sequence
(BLAST)

001: MCRYVDAVMT IPKGTLFPMC GMNLAFDREL IGPAMYFGLM GDGQPIGRYD DMWAGWCVKV ICDHMGWGVK TGLPYIWHSK ASNPFVNLRK EYNGIFWQEE
101: AIPFFQSLAL PKECTSVQQC YMELAKLVKE KLGKVDPYFI KLADGMVTWI EAWDELNSPD GAEAKAPKGK DE

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.