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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021473.1-P Field mustard cytosol 99.72 99.72
CDY60468 Canola cytosol, extracellular, peroxisome 98.88 98.88
CDX74267 Canola cytosol 98.88 98.88
CDX91983 Canola cytosol 98.88 98.88
CDY43248 Canola cytosol, extracellular, peroxisome 98.6 98.6
AT3G02230.1 Thale cress cytosol 96.64 96.64
CDY26446 Canola cytosol 88.24 94.03
CDX69510 Canola cytosol 87.96 93.73
CDX78646 Canola plasma membrane 88.52 92.67
CDX90981 Canola cytosol, extracellular, peroxisome 87.96 92.08
CDX85541 Canola peroxisome 87.68 91.79
CDX70629 Canola peroxisome 87.68 91.79
CDY27964 Canola cytosol 64.43 80.7
CDX73947 Canola cytosol 38.38 79.65
CDY64941 Canola cytosol 74.79 77.84
CDY00647 Canola cytosol 63.59 77.74
CDY34025 Canola cytosol 74.79 74.37
CDX83155 Canola cytosol 74.51 74.09
CDX69446 Canola cytosol 47.9 49.14
CDY55583 Canola cytosol 47.62 48.85
CDY27965 Canola cytosol 3.36 46.15
CDX78695 Canola cytosol 13.17 44.76
CDX85502 Canola cytosol 13.45 44.44
CDY38107 Canola cytosol 17.93 41.03
Protein Annotations
KEGG:00520+5.4.99.30MapMan:3.13.7.3GO:A0A078HAG7UniProt:A0A078HAG7EnsemblPlants:CDY34712ProteinID:CDY34712
ProteinID:CDY34712.1GO:GO:0003674GO:GO:0003824GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016866GO:GO:0030244GO:GO:0071669EnsemblPlantsGene:GSBRNA2T00057232001
InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPFAM:PF03214PIRSF:PIRSF016429PANTHER:PTHR31682PANTHER:PTHR31682:SF15
InterPro:RGPInterPro:RGP_famSUPFAM:SSF53448UniParc:UPI0004EE5225::
Description
BnaA01g33130DBnaA01g33130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAG7]
Coordinates
chrLK032340:+:193808..195907
Molecular Weight (calculated)
40454.9 Da
IEP (calculated)
5.983
GRAVY (calculated)
-0.121
Length
357 amino acids
Sequence
(BLAST)
001: MVEPANTVGI PLNHTALLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCVKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLSKEAV TVQQCYIELS KMVKEKLSAI DPYFAKLADA MVTWIEAWDE LNPATKA
Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)
001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA
Arabidopsis Description
RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.