Factsheet for AT3G02230.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	97.48	97.48
CDY43248	Canola	cytosol, extracellular, peroxisome	97.48	97.48
CDY60468	Canola	cytosol, extracellular, peroxisome	97.48	97.48
Bra001037.1-P	Field mustard	cytosol	96.92	96.92
Bra021473.1-P	Field mustard	cytosol	96.92	96.92
CDX91983	Canola	cytosol	96.92	96.92
CDY34712	Canola	cytosol	96.64	96.64
CDX74267	Canola	cytosol	96.36	96.36
AT5G15650.1	Thale cress	cytosol	94.68	93.89
AT3G08900.1	Thale cress	cytosol	82.63	81.49
AT5G50750.1	Thale cress	cytosol	75.91	74.45
AT5G16510.2	Thale cress	cytosol	48.18	49.43

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EntrezGene:821233	UniProt:A0A178VK37	ProteinID:AAF02115.1	ProteinID:AEE73781.1
EMBL:AF013627	ArrayExpress:AT3G02230	EnsemblPlantsGene:AT3G02230	RefSeq:AT3G02230	TAIR:AT3G02230	RefSeq:AT3G02230-TAIR-G
EnsemblPlants:AT3G02230.1	TAIR:AT3G02230.1	EMBL:BT002409	EMBL:BT008841	GO:GO:0000138	GO:GO:0003674
GO:GO:0003735	GO:GO:0003824	GO:GO:0005198	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005794	GO:GO:0005795	GO:GO:0005829	GO:GO:0005840	GO:GO:0005975	GO:GO:0006139
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555
GO:GO:0009628	GO:GO:0009651	GO:GO:0009832	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0016740	GO:GO:0016760	GO:GO:0016853	GO:GO:0016866	GO:GO:0022626	GO:GO:0030244
GO:GO:0030312	GO:GO:0033356	GO:GO:0042788	GO:GO:0052691	GO:GO:0071555	GO:GO:0071669
InterPro:IPR029044	EMBL:KJ138846	RefSeq:NP_186872.1	InterPro:Nucleotide-diphossugar_trans	ProteinID:OAP06697.1	PFAM:PF03214
PIRSF:PIRSF016429	PO:PO:0000005	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001170
PO:PO:0009001	PO:PO:0009005	PO:PO:0009025	PO:PO:0020030	PO:PO:0025195	PO:PO:0025281
PANTHER:PTHR31682	PANTHER:PTHR31682:SF15	UniProt:Q9SRT9	InterPro:RGP	Symbol:RGP1	InterPro:RGP_fam
SUPFAM:SSF53448	UniParc:UPI00000AC0A8	:	:	:	:

Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]

Coordinates

chr3:+:415389..417723

Molecular Weight (calculated)

40631.2 Da

IEP (calculated)

5.702

GRAVY (calculated)

-0.150

Length

357 amino acids

Sequence
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.