Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55583 | Canola | cytosol | 92.82 | 92.82 |
| Bra008616.1-P | Field mustard | cytosol | 92.82 | 92.82 |
| CDX69446 | Canola | cytosol | 92.82 | 92.82 |
| Bra023571.1-P | Field mustard | cytosol | 26.44 | 86.79 |
| Bra006359.1-P | Field mustard | cytosol | 25.86 | 85.71 |
| CDX85502 | Canola | cytosol | 26.44 | 85.19 |
| CDX78695 | Canola | cytosol | 25.0 | 82.86 |
| CDY38107 | Canola | cytosol | 34.77 | 77.56 |
| PGSC0003DMT400059506 | Potato | cytosol | 69.83 | 69.83 |
| Solyc04g051200.1.1 | Tomato | cytosol, unclear | 68.97 | 68.97 |
| VIT_04s0023g00110.t01 | Wine grape | cytosol | 67.24 | 65.55 |
| Os04t0660400-01 | Rice | cytosol, plasma membrane, plastid | 61.78 | 61.96 |
| EES11595 | Sorghum | cytosol | 61.78 | 61.78 |
| TraesCS2B01G526700.1 | Wheat | cytosol, golgi | 60.34 | 60.34 |
| TraesCS2D01G498900.1 | Wheat | cytosol, golgi, unclear | 60.06 | 60.06 |
| TraesCS2A01G498600.1 | Wheat | cytosol, unclear | 60.06 | 60.06 |
| HORVU2Hr1G111070.2 | Barley | cytosol | 60.06 | 60.06 |
| KRH00886 | Soybean | cytosol, peroxisome, plastid | 72.13 | 58.78 |
| KRH40343 | Soybean | cytosol, extracellular, plastid | 71.55 | 58.31 |
| Zm00001d001979_P002 | Maize | extracellular, vacuole | 60.92 | 50.12 |
| GSMUA_Achr7P00470_001 | Banana | cytosol | 49.43 | 50.0 |
| AT3G02230.1 | Thale cress | cytosol | 49.43 | 48.18 |
| AT5G15650.1 | Thale cress | cytosol | 48.85 | 47.22 |
| AT3G08900.1 | Thale cress | cytosol | 47.7 | 45.86 |
| AT5G50750.1 | Thale cress | cytosol | 46.26 | 44.23 |
Protein Annotations
| KEGG:00520+5.4.99.30 | MapMan:3.13.7.3 | EntrezGene:831513 | ProteinID:AED92302.1 | ProteinID:AED92303.1 | ArrayExpress:AT5G16510 |
| EnsemblPlantsGene:AT5G16510 | RefSeq:AT5G16510 | TAIR:AT5G16510 | RefSeq:AT5G16510-TAIR-G | EnsemblPlants:AT5G16510.2 | TAIR:AT5G16510.2 |
| EMBL:AY088511 | EMBL:AY091141 | EMBL:AY114087 | Unigene:At.6462 | ProteinID:BAB09620.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0005975 | GO:GO:0006139 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009832 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016853 | GO:GO:0016866 |
| GO:GO:0030244 | GO:GO:0033356 | GO:GO:0071555 | GO:GO:0071669 | EMBL:KJ138685 | RefSeq:NP_197155.1 |
| RefSeq:NP_850831.1 | PFAM:PF03214 | PIRSF:PIRSF016429 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31682 | PANTHER:PTHR31682:SF4 | UniProt:Q9FFD2 |
| InterPro:RGP | InterPro:RGP_fam | UniParc:UPI00000A5EA4 | UniProt:W8Q2T5 | : | : |
Description
RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
Coordinates
chr5:+:5392576..5394565
Molecular Weight (calculated)
38587.3 Da
IEP (calculated)
4.826
GRAVY (calculated)
-0.049
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.