Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85502 | Canola | cytosol | 48.08 | 69.44 |
| CDX78695 | Canola | cytosol | 41.03 | 60.95 |
| CDY55583 | Canola | cytosol | 80.13 | 35.92 |
| CDX69446 | Canola | cytosol | 80.13 | 35.92 |
| AT5G16510.2 | Thale cress | cytosol | 77.56 | 34.77 |
| PGSC0003DMT400059506 | Potato | cytosol | 60.26 | 27.01 |
| Solyc04g051200.1.1 | Tomato | cytosol, unclear | 58.97 | 26.44 |
| EES11595 | Sorghum | cytosol | 53.85 | 24.14 |
| VIT_04s0023g00110.t01 | Wine grape | cytosol | 54.49 | 23.81 |
| TraesCS2B01G526700.1 | Wheat | cytosol, golgi | 51.92 | 23.28 |
| CDY27965 | Canola | cytosol | 3.85 | 23.08 |
| Os04t0660400-01 | Rice | cytosol, plasma membrane, plastid | 51.28 | 23.05 |
| TraesCS2A01G498600.1 | Wheat | cytosol, unclear | 51.28 | 22.99 |
| HORVU2Hr1G111070.2 | Barley | cytosol | 51.28 | 22.99 |
| TraesCS2D01G498900.1 | Wheat | cytosol, golgi, unclear | 50.64 | 22.7 |
| KRH00886 | Soybean | cytosol, peroxisome, plastid | 60.9 | 22.25 |
| KRH40343 | Soybean | cytosol, extracellular, plastid | 60.26 | 22.01 |
| CDY00647 | Canola | cytosol | 37.18 | 19.86 |
| Zm00001d001979_P002 | Maize | extracellular, vacuole | 53.85 | 19.86 |
| CDX73947 | Canola | cytosol | 21.15 | 19.19 |
| GSMUA_Achr7P00470_001 | Banana | cytosol | 41.67 | 18.9 |
| CDY34712 | Canola | cytosol | 41.03 | 17.93 |
| CDX74267 | Canola | cytosol | 41.03 | 17.93 |
| CDX91983 | Canola | cytosol | 41.03 | 17.93 |
| CDY60468 | Canola | cytosol, extracellular, peroxisome | 41.03 | 17.93 |
| CDY43248 | Canola | cytosol, extracellular, peroxisome | 41.03 | 17.93 |
| CDY64941 | Canola | cytosol | 37.18 | 16.91 |
| CDY34025 | Canola | cytosol | 35.9 | 15.6 |
| CDX83155 | Canola | cytosol | 35.9 | 15.6 |
| CDY26446 | Canola | cytosol | 30.13 | 14.03 |
| CDX90981 | Canola | cytosol, extracellular, peroxisome | 30.13 | 13.78 |
| CDX85541 | Canola | peroxisome | 30.13 | 13.78 |
| CDX69510 | Canola | cytosol | 29.49 | 13.73 |
| CDY27964 | Canola | cytosol | 25.0 | 13.68 |
| CDX78646 | Canola | plasma membrane | 29.49 | 13.49 |
| CDX70629 | Canola | peroxisome | 28.85 | 13.2 |
Protein Annotations
| EnsemblPlants:CDY38107 | EnsemblPlantsGene:GSBRNA2T00065383001 | GO:A0A078HJS1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016866 | GO:GO:0030244 |
| InterPro:RGP_fam | KEGG:00520+5.4.99.30 | PANTHER:PTHR31682 | PANTHER:PTHR31682:SF4 | PFAM:PF03214 | ProteinID:CDY38107 |
| ProteinID:CDY38107.1 | UniParc:UPI0004EE5CA8 | UniProt:A0A078HJS1 | MapMan:35.1 | : | : |
Description
BnaC02g06660DBnaC02g06660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJS1]
Coordinates
chrLK032416:-:168666..169309
Molecular Weight (calculated)
17613.9 Da
IEP (calculated)
4.630
GRAVY (calculated)
-0.295
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MPYDPYREGA DFVCGYPFSL RTGVPCGVSC GLWFNLSDID ARCKLSRQSR GTLLPALRIA EEGRVRWETL EDVWNERGDA VESLRKKWER MKLMEKSDLF
101: FASLKLPESA VTVEDCVVEV AKAVREQLGS DDPAFTQAAD AMVKWVQLWS EINSSG
101: FASLKLPESA VTVEDCVVEV AKAVREQLGS DDPAFTQAAD AMVKWVQLWS EINSSG
001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA
Arabidopsis Description
RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.