Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g019750.2.1 | Tomato | cytosol | 98.57 | 98.57 |
| GSMUA_Achr7P00470_001 | Banana | cytosol | 79.66 | 80.81 |
| PGSC0003DMT400063316 | Potato | cytosol | 81.38 | 77.81 |
| PGSC0003DMT400068326 | Potato | cytosol | 78.22 | 77.56 |
| PGSC0003DMT400003478 | Potato | cytosol | 78.22 | 76.9 |
| PGSC0003DMT400004878 | Potato | cytosol, extracellular | 79.94 | 76.86 |
| PGSC0003DMT400072896 | Potato | cytosol, mitochondrion | 79.37 | 76.52 |
| PGSC0003DMT400059506 | Potato | cytosol | 50.14 | 50.29 |
| PGSC0003DMT400019802 | Potato | cytosol | 45.85 | 38.93 |
Protein Annotations
| KEGG:00520+5.4.99.30 | EntrezGene:102600369 | MapMan:3.13.7.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016866 | GO:GO:0030244 |
| GO:GO:0071669 | UniProt:M1B8D0 | PFAM:PF03214 | EnsemblPlantsGene:PGSC0003DMG400015269 | PGSC:PGSC0003DMG400015269 | EnsemblPlants:PGSC0003DMT400039494 |
| PIRSF:PIRSF016429 | PANTHER:PTHR31682 | PANTHER:PTHR31682:SF15 | InterPro:RGP | InterPro:RGP_fam | UniParc:UPI0002968D14 |
| RefSeq:XP_006351518.1 | : | : | : | : | : |
Description
GRP 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400015269]
Coordinates
chr3:+:50329992..50331539
Molecular Weight (calculated)
39676.6 Da
IEP (calculated)
5.466
GRAVY (calculated)
-0.250
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTLNGEVD IVIPTIRSLN FLEDWRPFFE PYHLIIIQDG DPTKEIKVPE GFDYELYNRN DINRILGPKA NCISFKDGAC RCFGFLVSKK KFIYTIDDDC
101: FVAKDPSGKE IDALAKHLEN LTKPSTPYYF NTLYDPYREG ADFVRGYPFS LRAGVPTAVS HGLWLNIPDY DAPTQLVKPL DRNTRYVDAV LTIPKGTLYP
201: MCAMNLAFNR ELIGAAMYFG IMGDGQPLGR YDDMWAGWCT KVVCDHLGYG VKTGLPYLWH SKASNPFVNL KKEYNGLFWQ EEMIPFFQSV ILPKKCTNAQ
301: ECYLELAKQA KEKLGPVDPY FNNLADAMVT WIEAWEEFNA PAKVKNGTA
101: FVAKDPSGKE IDALAKHLEN LTKPSTPYYF NTLYDPYREG ADFVRGYPFS LRAGVPTAVS HGLWLNIPDY DAPTQLVKPL DRNTRYVDAV LTIPKGTLYP
201: MCAMNLAFNR ELIGAAMYFG IMGDGQPLGR YDDMWAGWCT KVVCDHLGYG VKTGLPYLWH SKASNPFVNL KKEYNGLFWQ EEMIPFFQSV ILPKKCTNAQ
301: ECYLELAKQA KEKLGPVDPY FNNLADAMVT WIEAWEEFNA PAKVKNGTA
001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA
Arabidopsis Description
RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.