Factsheet for Solyc03g019750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039494	Potato	cytosol	98.57	98.57
Solyc03g114860.2.1	Tomato	cytosol, extracellular, unclear	81.66	81.2
GSMUA_Achr7P00470_001	Banana	cytosol	79.94	81.1
Solyc04g005340.2.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	80.23	78.43
Solyc05g012070.2.1	Tomato	extracellular	80.52	77.62
Solyc02g089170.2.1	Tomato	cytosol, unclear	77.36	76.7
Solyc03g070390.2.1	Tomato	cytosol, unclear	76.5	76.29
Solyc02g065740.2.1	Tomato	cytosol, unclear	77.94	75.77
Solyc04g051200.1.1	Tomato	cytosol, unclear	51.0	51.15

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0005975	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009832	GO:GO:0009987	GO:GO:0016866
GO:GO:0030244	GO:GO:0033356	GO:GO:0052691	GO:GO:0071669	InterPro:IPR029044	UniProt:K4BEU7
InterPro:Nucleotide-diphossugar_trans	PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF15	InterPro:RGP
InterPro:RGP_fam	SUPFAM:SSF53448	EnsemblPlantsGene:Solyc03g019750.2	EnsemblPlants:Solyc03g019750.2.1	UniParc:UPI000276871A	:

Description

Probable UDP-arabinopyranose mutase 4 [Source:Projected from Arabidopsis thaliana (AT5G50750) UniProtKB/Swiss-Prot;Acc:Q9LUE6]

Coordinates

chr3:+:61408666..61410195

Molecular Weight (calculated)

39649.5 Da

IEP (calculated)

5.459

GRAVY (calculated)

-0.243

Length

349 amino acids

Sequence
(BLAST)

001: MAPTLNGEVD IVIPTIRSLN FLENWRPFFE PYHLIIIQDG DPTKEIKVPE GFDYELYNRN DINRILGPKA NCISFKDGAC RCFGFLVSKK KFIYTIDDDC
101: FVAKDPSGKE IDALAKHLEN LTKPSTPYFF NTLYDPYREG ADFVRGYPFS LRAGVPTAVS HGLWLNIPDY DAPTQLVKPL DRNTRYVDAV MTIPKGTLYP
201: MCAMNLAFNR ELIGAAMYFG IMGDGQPLGR YDDMWAGWCT KVVCDHLGYG VKTGLPYLWH SKASNPFVNL KKEYNGLFWQ EEMIPFFQSV ILPKKCTNAQ
301: ECYLELAKQA KEKLGPVDPY FNNLADAMVT WIEAWEEFNA PANVKNGSA

Best Arabidopsis Sequence Match ( AT5G16510.1 )
(BLAST)

001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA

Arabidopsis Description

RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.