Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G344800.1 | Wheat | extracellular | 84.93 | 87.32 |
| TraesCS5B01G527600.1 | Wheat | extracellular | 73.97 | 77.14 |
| TraesCS5B01G526600.1 | Wheat | extracellular | 58.9 | 30.07 |
| TraesCS5B01G526500.1 | Wheat | extracellular | 58.22 | 29.82 |
| TraesCS5B01G527000.1 | Wheat | extracellular | 54.79 | 28.07 |
| TraesCS5B01G568900.1 | Wheat | extracellular, plasma membrane | 46.58 | 25.76 |
| TraesCS5B01G527800.1 | Wheat | extracellular | 62.33 | 21.41 |
| TraesCS5B01G572200.1 | Wheat | extracellular | 52.74 | 21.21 |
| TraesCS7B01G002400.1 | Wheat | extracellular | 52.74 | 20.53 |
| TraesCS7B01G002800.1 | Wheat | extracellular | 49.32 | 19.2 |
| TraesCS5B01G371700.1 | Wheat | extracellular | 48.63 | 19.19 |
| TraesCS5B01G527100.1 | Wheat | vacuole | 55.48 | 18.84 |
| TraesCS7B01G000500.1 | Wheat | extracellular | 45.89 | 18.01 |
| TraesCS7B01G000700.1 | Wheat | extracellular | 38.36 | 16.47 |
| TraesCS7B01G000600.1 | Wheat | extracellular | 51.37 | 14.31 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G528000.1 | EnsemblPlantsGene:TraesCS5B01G528000 | Gene3D:2.150.10.10 | InterPro:IPR011049 | InterPro:Serralysin-like_metalloprot_C | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF101967 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5B:+:686841671..686842617
Molecular Weight (calculated)
14639.3 Da
IEP (calculated)
8.239
GRAVY (calculated)
0.094
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKCFLVLVF MAFLLPAAYA MCHPDDLQAP RGXXXEVPKG LTLLKGLTVV DRSLGIAFTN LLFVRSGSGN IVSGNGNTVV SGDNNNVSGS NNTVTSGSSN
101: VIVDSNHVVT GSNNTVSGNN NRVTGNNNVV SGSNQVVSGD NKVVTG
101: VIVDSNHVVT GSNNTVSGNN NRVTGNNNVV SGSNQVVSGD NKVVTG
001: MEKSNQPVHV TLSELKDGDK EIVDAEFLVD LLESYRFGKD NVPAREFRSK AAATAPAPVN TTEIELEEDN DGSQAQGNNS VSESTSSLFS DSDPIVLEST
101: VSETGSNEES ETGSNEENGN NWLESSSTNL PNVENKRQRN GEDCEIEEEE ENNERSLSDS EEKSNLEKLL GTQENYELGN EDEEKNERSS SDSEEKSNLE
201: NLLATQENYE LYCPSCSTCI TRNVVLKKRK RGKHVNSSLD LKPDIPVVEP DEPSDIEEME SPVKVYVPET RIEDDQEDKE GTIFTCLVCD LKYFIRLGTK
301: FLQLDYIRGK PVEKSVEEYI DVRKSINTTQ SPPQIQPDGE RFAIELLKST VYGGLTETIT SLGVVSSASA SGSSTMNILA LAVANLAGGL IVLAQNFQDL
401: RNSSDQEKDR YEELLGRRTK SRIHILVAVM SYIFFGLIPP LVYAFSFYET GIKNYKLISV FLGSLVCVIL LGSIKVYVRK PTNSCGSTKA YLKSAAYYTS
501: IVVASCGISY VVGDIMGEYI EKLSLVGLDQ ISITSPCYGI KPEECRFTSF
101: VSETGSNEES ETGSNEENGN NWLESSSTNL PNVENKRQRN GEDCEIEEEE ENNERSLSDS EEKSNLEKLL GTQENYELGN EDEEKNERSS SDSEEKSNLE
201: NLLATQENYE LYCPSCSTCI TRNVVLKKRK RGKHVNSSLD LKPDIPVVEP DEPSDIEEME SPVKVYVPET RIEDDQEDKE GTIFTCLVCD LKYFIRLGTK
301: FLQLDYIRGK PVEKSVEEYI DVRKSINTTQ SPPQIQPDGE RFAIELLKST VYGGLTETIT SLGVVSSASA SGSSTMNILA LAVANLAGGL IVLAQNFQDL
401: RNSSDQEKDR YEELLGRRTK SRIHILVAVM SYIFFGLIPP LVYAFSFYET GIKNYKLISV FLGSLVCVIL LGSIKVYVRK PTNSCGSTKA YLKSAAYYTS
501: IVVASCGISY VVGDIMGEYI EKLSLVGLDQ ISITSPCYGI KPEECRFTSF
Arabidopsis Description
MEB2Membrane protein of ER body 2 [Source:UniProtKB/Swiss-Prot;Acc:F4KFS7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.