Factsheet for TraesCS7B01G000600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G563400.1	Wheat	extracellular	66.03	93.51
TraesCS5B01G572200.1	Wheat	extracellular	62.4	90.08
TraesCS7B01G002800.1	Wheat	extracellular	55.53	77.6
TraesCS7B01G002400.1	Wheat	extracellular	54.77	76.53
TraesCS5B01G568900.1	Wheat	extracellular, plasma membrane	37.79	75.0
HORVU5Hr1G118200.1	Barley	endoplasmic reticulum, mitochondrion, vacuole	54.96	73.28
TraesCS7B01G000700.1	Wheat	extracellular	43.89	67.65
TraesCS5B01G371700.1	Wheat	extracellular	47.71	67.57
TraesCS7B01G000500.1	Wheat	extracellular	47.52	66.94
TraesCS5B01G526600.1	Wheat	extracellular	35.69	65.38
TraesCS5B01G526500.1	Wheat	extracellular	35.31	64.91
TraesCS5B01G527000.1	Wheat	extracellular	34.35	63.16
TraesCS5B01G527600.1	Wheat	extracellular	14.89	55.71
TraesCS5B01G528000.1	Wheat	extracellular	14.31	51.37
TraesCS5B01G527100.1	Wheat	vacuole	37.02	45.12
TraesCS5B01G527800.1	Wheat	extracellular	36.45	44.94

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF08263	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SUPFAM:SSF101967	SUPFAM:SSF52058
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7B01G000600	EnsemblPlants:TraesCS7B01G000600.1	TIGR:cd12796
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:222373..224848

Molecular Weight (calculated)

56460.4 Da

IEP (calculated)

9.249

GRAVY (calculated)

0.023

Length

524 amino acids

Sequence
(BLAST)

001: MNPMAKCCLL LLPIFFLAFL LPEAHVTSCH PADLRALQDF VRNLSGGGVL LQATWFGAAC CSWEGVGCDA ATGRVMALRL PRRGLAGPFP GTSLAGLAHL
101: EELDLGSNNF HNISGVLTVL RGCQNLTTLI LTKNFGGEEL LGDGIIGEFK SLEVLALGDC ALKGRVPEWL SQCKKMEVLD LSGNQLVGAI PSWIGELHHL
201: CYLDLSNNSL VGDAPKSLAL LKGLAPNGRS PGMVFANMPL YVKHNRITLG RRLNELPNVI TGINNVVRSG RKNVICGNDN TVIFGDENTI SGNENTVSGN
301: NHVVYGSKHV VSGSRHVITG RNSFVSGSYN NVSGIYHVVS GSNNVVFGSN NSVSGRNHIV SGDNKVITGV VLCVFKVVHL YACTTQGVRP IILLEMAMNA
401: TAASATAAAA ANISTRSWEP RPSHHAPHQG QLCDRLMQHA LLRPPRRHPR GRCGPLRRLA QPPPVLRPRL FSLSSLVPSR QAAFNMSDRN LNRHIDMYYD
501: GATRASLRFY DPLVASGPAF HAGW

Best Arabidopsis Sequence Match ( AT2G02220.1 )
(BLAST)

0001: MRVHRFCVIV IFLTELLCFF YSSESQTTSR CHPHDLEALR DFIAHLEPKP DGWINSSSST DCCNWTGITC NSNNTGRVIR LELGNKKLSG KLSESLGKLD
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV

Arabidopsis Description

PSKR1Phytosulfokine receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.