Factsheet for TraesCS5B01G527100.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G526300.1	Wheat	extracellular	95.12	95.12
TraesCS4A01G345900.1	Wheat	extracellular	93.95	93.09
TraesCS5B01G527000.1	Wheat	extracellular	55.58	83.86
HORVU5Hr1G119580.1	Barley	cytosol	30.7	73.74
HORVU5Hr1G119550.1	Barley	extracellular, mitochondrion, plastid, vacuole	82.33	72.99
TraesCS5B01G526500.1	Wheat	extracellular	46.51	70.18
TraesCS5B01G526600.1	Wheat	extracellular	45.81	68.88
TraesCS5B01G527800.1	Wheat	extracellular	65.81	66.59
TraesCS5B01G568900.1	Wheat	extracellular, plasma membrane	37.67	61.36
TraesCS5B01G527600.1	Wheat	extracellular	18.84	57.86
TraesCS5B01G528000.1	Wheat	extracellular	18.84	55.48
TraesCS7B01G002400.1	Wheat	extracellular	46.28	53.07
TraesCS5B01G572200.1	Wheat	extracellular	44.42	52.62
TraesCS7B01G002800.1	Wheat	extracellular	45.81	52.53
TraesCS5B01G371700.1	Wheat	extracellular	44.19	51.35
TraesCS7B01G000500.1	Wheat	extracellular	43.72	50.54
TraesCS7B01G000700.1	Wheat	extracellular	37.91	47.94
TraesCS7B01G000600.1	Wheat	extracellular	45.12	37.02

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SMART:SM00369
SUPFAM:SSF101967	SUPFAM:SSF52058	InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5B01G527100	EnsemblPlants:TraesCS5B01G527100.1
TIGR:cd12796	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:686432143..686433608

Molecular Weight (calculated)

45322.7 Da

IEP (calculated)

6.576

GRAVY (calculated)

0.041

Length

430 amino acids

Sequence
(BLAST)

001: MARCWLLLVF MAFILPAANA TPCHPDDLHA LRGFAGELGG GGALLRAAWS GASCCGWEGV GCDSTSGRVT VLRLPWRGLA GQIPGGSLAG LVWLEELFLG
101: SNHFVGVLPD ELFGLVKLRK LSLASNELTG EVSPRLGELT HLTLLDLSAN RFSGPLPDVF GDLTSLEHLA MHSNGFSGFL PPSLSSLSSL RELNLRNNSM
201: SGPIARVSFS DMPLLASLDF STNSLTGWIP TSLAGCGELK SLNLANNILV GTIPSWIGEF DNLWYLNLSN NSFVGEVPKS LLRLKGLATA GRSSGMVFIN
301: MPSFVNYERR ALDEQPNTIT GTNNTVRSGR NNTMSGNDNI VMSGDSNTVS GSFNTLVCGN NNILSGDHHV VSGSNHIVTN SFNKVTGCTN NVSGSNHTVS
401: GSNNTVTGSS NTVSGNNHVV SGSNRVVTGD

Best Arabidopsis Sequence Match ( AT1G33610.1 )
(BLAST)

001: MNSLSFTLFI FSVITFLQCL SSTGAATCHP DDEAGLLAFK SGITQDPSGM LSSWKKGTSC CSWKGIICFN SDRVTMLELV GFPKKPERSL SGTLSPSLAK
101: LQHLSVISLG GHVNITGSFP KFLLQLPKLR YVDIQNNRLS GPLPANIGVL SLLEEIFLQG NKFTGPIPNS ISNLTRLSYL IFGGNLLTGT IPLGIANLKL
201: MQNLQLGDNR LSGTIPDIFE SMKLLKFLDL SSNEFYGKLP LSIATLAPTL LALQVSQNNL SGAIPNYISR FNKLEKLDLS KNRFSGVVPQ GFVNLTNINN
301: LDLSHNLLTG QFPDLTVNTI EYLDLSYNQF QLETIPQWVT LLPSVFLLKL AKCGIKMSLD DWKPAEPLYY HYIDLSKNEI SGSLERFLNE TRYLLEFRAA
401: ENKLRFDMGN LTFPRTLKTL DLSRNLVFGK VPVTVAGLQR LNLSQNHLCG ELPTTKFPAS AFAGNDCLCG SPLSPCKA

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4HR91]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.