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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • extracellular 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plastid, vacuole
Any Predictor:extracellular, mitochondrion, plastid, vacuole
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
TargetP:mitochondrion
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G119580.1 Barley cytosol 33.4 90.5
TraesCS5D01G526200.1 Wheat extracellular 74.64 83.99
TraesCS5B01G527000.1 Wheat extracellular 49.07 83.51
TraesCS4A01G346100.1 Wheat vacuole 73.81 83.26
TraesCS4A01G345900.1 Wheat extracellular 74.23 82.95
TraesCS5D01G526300.1 Wheat extracellular 73.2 82.56
TraesCS5B01G527100.1 Wheat vacuole 72.99 82.33
HORVU5Hr1G119480.1 Barley extracellular 40.41 68.53
HORVU5Hr1G119520.5 Barley endoplasmic reticulum, extracellular 55.88 62.16
HORVU7Hr1G023380.1 Barley cytosol 24.12 59.39
HORVU7Hr1G075070.1 Barley cytosol, mitochondrion, plastid 23.92 58.88
HORVU5Hr1G091960.1 Barley extracellular 5.36 50.0
HORVU5Hr1G091950.1 Barley mitochondrion 30.31 48.84
HORVU5Hr1G118200.1 Barley endoplasmic reticulum, mitochondrion, vacuole 38.56 47.58
HORVU2Hr1G003920.1 Barley cytosol 17.32 29.07
HORVU1Hr1G003430.1 Barley plastid 9.48 22.12
Protein Annotations
EnsemblPlants:HORVU5Hr1G119550.1EnsemblPlantsGene:HORVU5Hr1G119550Gene3D:2.150.10.10Gene3D:3.80.10.10InterPro:IPR011049InterPro:IPR032675
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt_4InterPro:Leu-rich_rpt_typical-subtypInterPro:Serralysin-like_metalloprot_CPANTHER:PTHR43932
PANTHER:PTHR43932:SF10PFAM:PF08263PFAM:PF12799SEG:segSMART:SM00369SUPFAM:SSF101967
SUPFAM:SSF52058UniParc:UPI000B473871UniProt:A0A287SXJ1MapMan:35.1::
Description
No Description!
Coordinates
chrchr5H:-:656076908..656078730
Molecular Weight (calculated)
51680.0 Da
IEP (calculated)
7.797
GRAVY (calculated)
-0.126
Length
485 amino acids
Sequence
(BLAST)
001: CGRALALTAR ARGIRWHAPP SSFRQQHLLS KTKRFSPSSY VRVYSHSRPP LNPSSMARCW LLLLLCAFLW PAVSATPCHH HDLHALRGFA EELGGGGALL
101: RTAWSGASCC DWEGVGCDGA TGRVTALRLP GHGLAGPIPG ASLAGLVWLE ELFLGSNSFV GVLPDELFGL ARLRKLSLAS NELTGELSPR LGELTRLTSL
201: DLSDNRFSGR LPDVFDDLTS LEHLAAHSND FSGFLPPSLA SLSSLRELNL RNNSMSGPIA RVSFSGMPFL SSVDFSTNHL TGWLPTSLAA CGELRSLNLA
301: NNTLVGNIPS WMGEFDRLWY LDLSNNSFVG EVPRSLIRLM DLTTVGTSPG MALSNLPLYV NHNRRTLDEQ PNTITGTNNT VRSGRNNTMS GNDNTVMSGD
401: NNAVSGSFNT LVCGDNNVLT GDHHVVSGSN HIVTNSYNKV SGCTNNVSGS NHTVSGSNNT VSGSSNTVSG SNHIVSGSNK IVTGG
Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)
0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ
Arabidopsis Description
PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.