Factsheet for TraesCS5D01G526200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G527000.1	Wheat	extracellular	63.81	96.49
TraesCS4A01G346100.1	Wheat	vacuole	95.13	95.35
TraesCS5D01G526300.1	Wheat	extracellular	84.45	84.65
HORVU5Hr1G119580.1	Barley	cytosol	31.79	76.54
HORVU5Hr1G119550.1	Barley	extracellular, mitochondrion, plastid, vacuole	83.99	74.64
TraesCS5D01G525500.1	Wheat	extracellular	45.94	72.0
TraesCS5D01G525600.1	Wheat	extracellular	46.64	70.28
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	68.68	69.98
TraesCS5D01G525300.1	Wheat	extracellular	46.4	69.93
TraesCS5D01G525400.1	Wheat	extracellular	46.17	69.1
TraesCS5D01G526600.1	Wheat	extracellular	66.36	67.61
TraesCS5D01G527000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	63.11	67.33
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	42.92	66.07
TraesCS5D01G526900.1	Wheat	extracellular	18.79	57.86
TraesCS5D01G561100.1	Wheat	extracellular	47.56	54.67
TraesCS5D01G563500.1	Wheat	extracellular	47.56	54.67
TraesCS5D01G563600.1	Wheat	extracellular	47.56	54.67
TraesCS5D01G563400.1	Wheat	extracellular	46.87	54.59
TraesCS5D01G378800.1	Wheat	extracellular	46.64	54.18
TraesCS5D01G563700.1	Wheat	extracellular	45.71	52.96
TraesCS5D01G563300.1	Wheat	extracellular	31.79	43.49

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SUPFAM:SSF101967	SUPFAM:SSF52058
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G526200	EnsemblPlants:TraesCS5D01G526200.1	TIGR:cd12796	SEG:seg

Description

No Description!

Coordinates

chr5D:+:544148968..544150263

Molecular Weight (calculated)

45644.0 Da

IEP (calculated)

7.797

GRAVY (calculated)

0.033

Length

431 amino acids

Sequence
(BLAST)

001: MARCWLLLLF WAFLWPAASA VPCHPDDLRA LRGFAGDLSG GGVLLRTAWS GASCCSWEGV GCDSASGRVT VLRLPRRGLT GLIPGASLAG LVWLEELFLG
101: LNSFVGVLPD ALFGLTRLRK LSLASNELTG QVSSRLGELT RLTLLDLSAN RFFGRLPDVF GDLTSLEHLA AHSNGFSGFL PPSLSSLSSL RELNLRNNTL
201: SGPIARVSFS GMPLLASVDF STNYLTGWLP TSLAGCDELK SLNLANNTLV GTIPSWIGEF DHLWYLNLSN NSFVGEVPKS LLRLKEGLAT AGRSSGMVFT
301: NMLLYVNDKR RALNEQPNTI TGSNNTVRSG RNNSMSGNDN TVISGDNNAV SGSFNTLVCG DNNVLTGDHH VVSGSNHIVT NSYNKVSGCT NNVSGSHHTV
401: SGSNNAVSGS NNTVSGSNHV VSGSNKIVTD G

Best Arabidopsis Sequence Match ( AT1G33610.1 )
(BLAST)

001: MNSLSFTLFI FSVITFLQCL SSTGAATCHP DDEAGLLAFK SGITQDPSGM LSSWKKGTSC CSWKGIICFN SDRVTMLELV GFPKKPERSL SGTLSPSLAK
101: LQHLSVISLG GHVNITGSFP KFLLQLPKLR YVDIQNNRLS GPLPANIGVL SLLEEIFLQG NKFTGPIPNS ISNLTRLSYL IFGGNLLTGT IPLGIANLKL
201: MQNLQLGDNR LSGTIPDIFE SMKLLKFLDL SSNEFYGKLP LSIATLAPTL LALQVSQNNL SGAIPNYISR FNKLEKLDLS KNRFSGVVPQ GFVNLTNINN
301: LDLSHNLLTG QFPDLTVNTI EYLDLSYNQF QLETIPQWVT LLPSVFLLKL AKCGIKMSLD DWKPAEPLYY HYIDLSKNEI SGSLERFLNE TRYLLEFRAA
401: ENKLRFDMGN LTFPRTLKTL DLSRNLVFGK VPVTVAGLQR LNLSQNHLCG ELPTTKFPAS AFAGNDCLCG SPLSPCKA

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4HR91]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.