Factsheet for TraesCS5D01G526800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G344700.1	Wheat	extracellular, vacuole	95.98	95.75
TraesCS5B01G527800.1	Wheat	extracellular	89.6	89.18
TraesCS5D01G526600.1	Wheat	extracellular	79.43	79.43
TraesCS5D01G527000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	71.16	74.5
TraesCS5D01G525500.1	Wheat	extracellular	46.1	70.91
TraesCS5D01G525600.1	Wheat	extracellular	46.81	69.23
TraesCS5D01G525300.1	Wheat	extracellular	46.57	68.88
TraesCS5D01G526200.1	Wheat	extracellular	69.98	68.68
TraesCS5D01G525400.1	Wheat	extracellular	45.86	67.36
TraesCS5D01G526300.1	Wheat	extracellular	67.38	66.28
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	41.84	63.21
TraesCS5D01G526900.1	Wheat	extracellular	20.8	62.86
TraesCS5D01G563400.1	Wheat	extracellular	46.57	53.24
TraesCS5D01G561100.1	Wheat	extracellular	46.81	52.8
TraesCS5D01G378800.1	Wheat	extracellular	46.1	52.56
TraesCS5D01G563500.1	Wheat	extracellular	46.57	52.53
TraesCS5D01G563600.1	Wheat	extracellular	46.57	52.53
TraesCS5D01G563700.1	Wheat	extracellular	43.97	50.0
TraesCS5D01G563300.1	Wheat	extracellular	33.1	44.44

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SMART:SM00369	SUPFAM:SSF101967	SUPFAM:SSF52058
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G526800	EnsemblPlants:TraesCS5D01G526800.1	TIGR:cd12796	SEG:seg

Description

No Description!

Coordinates

chr5D:+:544481525..544483018

Molecular Weight (calculated)

43852.4 Da

IEP (calculated)

8.667

GRAVY (calculated)

0.075

Length

423 amino acids

Sequence
(BLAST)

001: MAKCWLLLLL LLAFLLPAAH TKSCHPNDLR ALRGFAGNHG GGGVLLRAAW FGASCCGWEG VGCDSSSGRV MVLRLPGYGL AGPIPGASLA GLAQLEELFL
101: GSNSFVGSLP EELFSLAGLR KLSLESNKLT GKLSSRLGEL KNLTFLNLSV NRFFGRLPDV FGDLMSLDHL AMDSNGLSGS LPPSLSSLSS LSELNLRNNS
201: LSGPIARVNF SGMPLLASVD FSANNLSGSL PVSLADCSAL KSLTLANNQL VGTIPSWIGE LDNLRCLDVS NNSLVGEVPK GLTCLKCLAT ADRSVGMAFT
301: NMPLYAKRNR RVLQQQPNVL SGSNNTVRSG GGNVLSGDNT VISGNNNTLS GTNNTVVSGS NNVLTGSNHV VSGSNNVVSD TSHVVNGSNN TVSGRNNMVT
401: GNNNTVSGSN HVVSGNNKVV TGG

Best Arabidopsis Sequence Match ( AT5G61240.1 )
(BLAST)

001: MASRCELLLI CVFSLLIAFA HSKTLKRDVK ALNEIKASLG WRVVYSWVGD DPCGDGDLPP WSGVTCSTQG DYRVVTELEV YAVSIVGPFP IAVTNLLDLT
101: RLDLHNNKLT GPIPPQIGRL KRLKVLNLRW NKLQDVIPPE IGELKRLTHL YLSFNSFKGE IPKELAALPE LRYLYLQENR LIGRIPAELG TLQNLRHLDV
201: GNNHLVGTIR ELIRFDGSFP ALRNLYLNNN YLSGGIPAQL SNLTNLEIVY LSYNKFIGNI PFAIAHIPKL TYLYLDHNQF TGRIPDAFYK HPFLKEMYIE
301: GNMFKSGVNP IGTHKVLEVS DADFAV

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4K217]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.