Factsheet for TraesCS4A01G344700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	95.75	95.98
TraesCS5B01G527800.1	Wheat	extracellular	90.09	89.88
TraesCS4A01G344600.1	Wheat	extracellular	78.77	78.96
TraesCS4A01G345700.1	Wheat	extracellular	70.99	73.41
TraesCS4A01G347100.1	Wheat	extracellular	45.75	70.8
TraesCS4A01G346900.1	Wheat	extracellular, plasma membrane, vacuole	47.41	70.53
TraesCS4A01G347000.1	Wheat	extracellular	46.7	69.23
TraesCS4A01G346100.1	Wheat	vacuole	69.34	68.37
TraesCS4A01G347200.1	Wheat	extracellular	45.75	67.36
TraesCS4A01G347300.1	Wheat	extracellular	34.67	66.22
TraesCS4A01G345900.1	Wheat	extracellular	67.45	65.9
TraesCS1A01G407200.1	Wheat	extracellular	21.23	64.29
TraesCS4A01G344800.1	Wheat	extracellular	19.81	59.15
TraesCS5A01G369400.1	Wheat	extracellular	45.28	51.89

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10
SMART:SM00369	SUPFAM:SSF101967	SUPFAM:SSF52058	InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G344700
EnsemblPlants:TraesCS4A01G344700.1	TIGR:cd12796	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:624369585..624371127

Molecular Weight (calculated)

43929.4 Da

IEP (calculated)

8.347

GRAVY (calculated)

0.053

Length

424 amino acids

Sequence
(BLAST)

001: MAKCWLLLLL LLAFLLPAAH AKSCHPNDLR ALRGFAGNLG GGGVLLRAEW SGASCCGWEG VGCDSSSGRV TVLRLPGYGL TGPIPGASLA GLAQLEELFL
101: GSNSFVGSLP EELFSLAGLR KLSLESNELT GKLSSRLGEL KNLTFLNLSV NRFSGRLPDV FGDLMSLDHL AMHSNGLSGS LPPSLSSLSS LSELNLRNNS
201: LSGPIARVNF SGMPLLASVD FSTNNLSGSL PVSLADCSAL KSLTLANNQL VGTIPSWIGE LDNLRCLDIS NNSLVGEVPK GLTCLKCLAT ADRSVGMAFT
301: NMPLHVKRNR RVLQQQPNVL SGSNNTVRSG GGNVLSGDNN TVISGNNNTL SGTNNTVVSG SNNVLTGSHH VVSGSNNVVS DTSHVVNGSS NTVSGRNNMV
401: TGNNNTVSGS NHVVSGNNKV ITGG

Best Arabidopsis Sequence Match ( AT1G33610.1 )
(BLAST)

001: MNSLSFTLFI FSVITFLQCL SSTGAATCHP DDEAGLLAFK SGITQDPSGM LSSWKKGTSC CSWKGIICFN SDRVTMLELV GFPKKPERSL SGTLSPSLAK
101: LQHLSVISLG GHVNITGSFP KFLLQLPKLR YVDIQNNRLS GPLPANIGVL SLLEEIFLQG NKFTGPIPNS ISNLTRLSYL IFGGNLLTGT IPLGIANLKL
201: MQNLQLGDNR LSGTIPDIFE SMKLLKFLDL SSNEFYGKLP LSIATLAPTL LALQVSQNNL SGAIPNYISR FNKLEKLDLS KNRFSGVVPQ GFVNLTNINN
301: LDLSHNLLTG QFPDLTVNTI EYLDLSYNQF QLETIPQWVT LLPSVFLLKL AKCGIKMSLD DWKPAEPLYY HYIDLSKNEI SGSLERFLNE TRYLLEFRAA
401: ENKLRFDMGN LTFPRTLKTL DLSRNLVFGK VPVTVAGLQR LNLSQNHLCG ELPTTKFPAS AFAGNDCLCG SPLSPCKA

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4HR91]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.