Factsheet for TraesCS4A01G346900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G526500.1	Wheat	extracellular	94.74	94.74
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	83.51	85.0
TraesCS4A01G347000.1	Wheat	extracellular	82.81	82.52
TraesCS4A01G347100.1	Wheat	extracellular	79.3	82.48
TraesCS4A01G347200.1	Wheat	extracellular	81.75	80.9
TraesCS4A01G347300.1	Wheat	extracellular	53.68	68.92
TraesCS1A01G407200.1	Wheat	extracellular	30.88	62.86
TraesCS4A01G344800.1	Wheat	extracellular	28.42	57.04
TraesCS5A01G369400.1	Wheat	extracellular	67.02	51.62
TraesCS4A01G346100.1	Wheat	vacuole	75.44	50.0
TraesCS4A01G344700.1	Wheat	extracellular, vacuole	70.53	47.41
TraesCS4A01G344600.1	Wheat	extracellular	68.42	46.1
TraesCS4A01G345900.1	Wheat	extracellular	70.18	46.08
TraesCS4A01G345700.1	Wheat	extracellular	65.61	45.61

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SUPFAM:SSF101967	SUPFAM:SSF52058
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G346900	EnsemblPlants:TraesCS4A01G346900.1	TIGR:cd12796	SEG:seg

Description

No Description!

Coordinates

chr4A:-:625264346..625265203

Molecular Weight (calculated)

29486.8 Da

IEP (calculated)

8.156

GRAVY (calculated)

-0.048

Length

285 amino acids

Sequence
(BLAST)

001: MAKCGLLFLF LAFLLPAARA TSCHPDDLRA LRGFAGNLSG GAVLLRAAWS GASCCVWEGV SCDGTSGRVT ALRLPGHGLV GPIPGASLAG LARLEELNLA
101: NNKLVGTIPS WIGELDHLCY LDLSDNSLVG EVPKSLIRLK GLVIVGRSLG MVFTNMPLYV KRNRRTLDEQ PNTISGSNNT VRSGSTNVVS GNDNTVISGN
201: NNNVAGSNNT VVTGNNNTVT GSNHIVSGDK HIVTDNNNAV SGNDNNVSGS FHTVSGSHNT VSGTNNTVSG SNHVVSGSNK VVGDQ

Best Arabidopsis Sequence Match ( AT3G02880.1 )
(BLAST)

001: MKYKRKLSLS VVFLFVFYLA AVTSDLESDR RALLAVRNSV RGRPLLWNMS ASSPCNWHGV HCDAGRVTAL RLPGSGLFGS LPIGGIGNLT QLKTLSLRFN
101: SLSGPIPSDF SNLVLLRYLY LQGNAFSGEI PSLLFTLPSI IRINLGENKF SGRIPDNVNS ATRLVTLYLE RNQLSGPIPE ITLPLQQFNV SSNQLNGSIP
201: SSLSSWPRTA FEGNTLCGKP LDTCEAESPN GGDAGGPNTP PEKKDSDKLS AGAIVGIVIG CVVGLLLLLL ILFCLCRKRK KEENVPSRNV EAPVAAATSS
301: AAIPKETVVV VPPAKATGSE SGAVNKDLTF FVKSFGEFDL DGLLKASAEV LGKGTVGSSY KASFEHGLVV AVKRLRDVVV PEKEFRERLH VLGSMSHANL
401: VTLIAYYFSR DEKLLVFEYM SKGSLSAILH GNKGNGRTPL NWETRAGIAL GAARAISYLH SRDGTTSHGN IKSSNILLSD SYEAKVSDYG LAPIISSTSA
501: PNRIDGYRAP EITDARKISQ KADVYSFGVL ILELLTGKSP THQQLNEEGV DLPRWVQSVT EQQTPSDVLD PELTRYQPEG NENIIRLLKI GMSCTAQFPD
601: SRPSMAEVTR LIEEVSHSSG SPNPVSD

Arabidopsis Description

Probable inactive receptor kinase At3g02880 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.