Factsheet for TraesCS4A01G347100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G525500.1	Wheat	extracellular	97.08	96.73
TraesCS4A01G347000.1	Wheat	extracellular	89.42	85.66
HORVU5Hr1G119480.1	Barley	extracellular	86.13	82.52
TraesCS4A01G346900.1	Wheat	extracellular, plasma membrane, vacuole	82.48	79.3
TraesCS4A01G347200.1	Wheat	extracellular	81.75	77.78
TraesCS4A01G347300.1	Wheat	extracellular	56.2	69.37
TraesCS1A01G407200.1	Wheat	extracellular	32.85	64.29
TraesCS4A01G344800.1	Wheat	extracellular	29.93	57.75
TraesCS5A01G369400.1	Wheat	extracellular	62.77	46.49
TraesCS4A01G344700.1	Wheat	extracellular, vacuole	70.8	45.75
TraesCS4A01G346100.1	Wheat	vacuole	70.44	44.88
TraesCS4A01G344600.1	Wheat	extracellular	67.88	43.97
TraesCS4A01G345900.1	Wheat	extracellular	68.25	43.09
TraesCS4A01G345700.1	Wheat	extracellular	64.23	42.93

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF08263	PFAM:PF13855	PFscan:PS51257	PANTHER:PTHR43932	SUPFAM:SSF101967	SUPFAM:SSF52058
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G347100	EnsemblPlants:TraesCS4A01G347100.1	TIGR:cd12796	SEG:seg

Description

No Description!

Coordinates

chr4A:-:625321427..625322251

Molecular Weight (calculated)

28109.0 Da

IEP (calculated)

8.525

GRAVY (calculated)

-0.074

Length

274 amino acids

Sequence
(BLAST)

001: MAKCWLLLHL LAFLLPAASA TSCHTDDLHA LQGFAGNLGG GGVLLRAVWS GASCCGWEGV SCDGTSGRVT ALRLPGHGLA GPISGASLAG LTQLVELNLA
101: NNKLIGTISS WIGELDHLRY LDLSNNLLVD EVPKRLIQLK GLASTGRSLG NRRTLQQQQP NIISGTNNKV RSGRTNVVSG NDNTVISGNN NTVAGSNNTI
201: TTGSDNTVTG SNHVVSGSKH IVTDNNNVVS GIDNNVSGSF HTVSGSHNTV SGSNNTVSGS NHVVSGSNKV VTGG

Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)

0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ

Arabidopsis Description

PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.