Factsheet for TraesCS4A01G344600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G526600.1	Wheat	extracellular	95.74	95.74
TraesCS4A01G344700.1	Wheat	extracellular, vacuole	78.96	78.77
TraesCS4A01G345700.1	Wheat	extracellular	68.79	70.98
TraesCS4A01G346900.1	Wheat	extracellular, plasma membrane, vacuole	46.1	68.42
TraesCS4A01G347000.1	Wheat	extracellular	46.1	68.18
TraesCS4A01G347100.1	Wheat	extracellular	43.97	67.88
TraesCS1A01G407200.1	Wheat	extracellular	21.99	66.43
TraesCS4A01G347200.1	Wheat	extracellular	44.68	65.62
TraesCS4A01G346100.1	Wheat	vacuole	65.72	64.65
TraesCS4A01G345900.1	Wheat	extracellular	64.78	63.13
TraesCS4A01G347300.1	Wheat	extracellular	33.1	63.06
TraesCS4A01G344800.1	Wheat	extracellular	20.57	61.27
TraesCS5A01G369400.1	Wheat	extracellular	44.92	51.35

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF08263	PFAM:PF12799	PFscan:PS51450
PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SMART:SM00369	SUPFAM:SSF101967	SUPFAM:SSF52058	InterPro:Serralysin-like_metalloprot_C
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G344600	EnsemblPlants:TraesCS4A01G344600.1	TIGR:cd12796	SEG:seg	:

Description

No Description!

Coordinates

chr4A:+:624350460..624351932

Molecular Weight (calculated)

44512.0 Da

IEP (calculated)

7.890

GRAVY (calculated)

-0.007

Length

423 amino acids

Sequence
(BLAST)

001: MAKCQLLLLF LVFLLLAAHA KSCHPDDLRA LQGFAGNLGG GGALLRAAWS GASCCGWEGV GCDGGRGRVT VLRLPGYGLS GPVPGASLGG LAQLEELFLG
101: SNSFTGSLPT SLFSLVGLQK LSFESNQLTG QLSTHLQELK NLTLLDLSVN RFSGRLPDVF HDLTSLIHLS MHSNGFSGSL PPSLSSLLSL RELNLENNSL
201: SGPIARVNFS GMPLLASIDF AANYLSGSLP ISIADCTELK SLSLANNQLV GTIPSWIREL VHLRYLDLSN NSLIGDVPKG LTLLKGLTTA DRSQRMAFIN
301: MPLYVKRNRR TLQQQPNVIT GTNNYVRSGD GNTVSGNDNT VISGNDNTVS GSDNTVRSGN KNVLTGSNHV VSGTNNVVSD NDHVVNGNNN VVSGGNNMVT
401: GNNNVVSGSD HVVYGNNKVV SGG

Best Arabidopsis Sequence Match ( AT1G33590.2 )
(BLAST)

001: MQMDWSKTST LTSQLSSNLF PTTNSSLLSI NTTQFTTMNS SFTLFIFTFV IFLQCLNPTG AATCHPDDEA GLLAFKAGIT RDPSGILSSW KKGTACCSWN
101: GVTCLTTDRV SALSVAGQAD VAGSFLSGTL SPSLAKLKHL DGIYFTDLKN ITGSFPQFLF QLPNLKYVYI ENNRLSGTLP ANIGALSQLE AFSLEGNRFT
201: GPIPSSISNL TLLTQLKLGN NLLTGTIPLG VANLKLMSYL NLGGNRLTGT IPDIFKSMPE LRSLTLSRNG FSGNLPPSIA SLAPILRFLE LGHNKLSGTI
301: PNFLSNFKAL DTLDLSKNRF SGVIPKSFAN LTKIFNLDLS HNLLTDPFPV LNVKGIESLD LSYNQFHLNT IPKWVTSSPI IFSLKLAKCG IKMSLDDWKP
401: AQTFYYDFID LSENEITGSP ARFLNQTEYL VEFKAAGNKL RFDMGKLTFA KTLTTLDISR NLVFGKVPAM VAGLKTLNVS HNHLCGKLPV TKFPASAFVG
501: NDCLCGSPLS PCKA

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G33590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.