Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G526200.1 | Wheat | extracellular | 95.35 | 95.13 |
| TraesCS5B01G527000.1 | Wheat | extracellular | 62.79 | 94.74 |
| TraesCS4A01G345900.1 | Wheat | extracellular | 84.42 | 83.64 |
| HORVU5Hr1G119580.1 | Barley | cytosol | 31.63 | 75.98 |
| TraesCS4A01G346900.1 | Wheat | extracellular, plasma membrane, vacuole | 50.0 | 75.44 |
| HORVU5Hr1G119550.1 | Barley | extracellular, mitochondrion, plastid, vacuole | 83.26 | 73.81 |
| TraesCS4A01G347100.1 | Wheat | extracellular | 44.88 | 70.44 |
| TraesCS4A01G347000.1 | Wheat | extracellular | 46.28 | 69.58 |
| TraesCS4A01G344700.1 | Wheat | extracellular, vacuole | 68.37 | 69.34 |
| TraesCS4A01G347200.1 | Wheat | extracellular | 45.81 | 68.4 |
| TraesCS4A01G345700.1 | Wheat | extracellular | 63.49 | 66.59 |
| TraesCS4A01G344600.1 | Wheat | extracellular | 64.65 | 65.72 |
| TraesCS4A01G347300.1 | Wheat | extracellular | 32.79 | 63.51 |
| TraesCS1A01G407200.1 | Wheat | extracellular | 19.53 | 60.0 |
| TraesCS5A01G369400.1 | Wheat | extracellular | 47.44 | 55.14 |
| TraesCS4A01G344800.1 | Wheat | extracellular | 17.44 | 52.82 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G346100.1 | EnsemblPlantsGene:TraesCS4A01G346100 | Gene3D:2.150.10.10 | Gene3D:3.80.10.10 | InterPro:IPR011049 | InterPro:IPR032675 |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Serralysin-like_metalloprot_C | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF10 | PFAM:PF08263 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF101967 | SUPFAM:SSF52058 | TIGR:cd12796 | MapMan:35.1 |
Description
No Description!
Coordinates
chr4A:-:625164950..625166242
Molecular Weight (calculated)
45295.6 Da
IEP (calculated)
7.769
GRAVY (calculated)
0.043
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MARCCLLLLF WAFLWPAASA VPCHPDDLRS LRGFAGDLSG GAVLLRTAWS GASCCSWEGV GCDGTSARVT VLRLPSRGLT GPIPGASLAG LVWLEELFLG
101: SNSFMGVLPD ALFGLARLRK LSLASNELTG QLSSRFGELT HLTLLDLSTN RFFGRLPDVF DDLTSLEHLA AHSNGFSGFL PPSLSSLSSL RGLNLRNNTL
201: SGPIARVSFS GMPLLASVDF STNYLTGWLP ASLAGCGELK SLNLANNTLV GTIPSWIGEF DHLWYLNLSN NSFVGEVPKS LLRLKGLATA GRSSGMVFTN
301: MLLYVNDKRR ALNEQPNTIT GSNNTVKSGR NNSMSGNDNT VISGDNNAVS GSFNTLVCGD NNVLTGDHHV VSGSNHIVTN SYNKVSGCTN NVSGSHHTVS
401: GSNNAVSGSN NTVSGSNHVV SGSNKIVTDG
101: SNSFMGVLPD ALFGLARLRK LSLASNELTG QLSSRFGELT HLTLLDLSTN RFFGRLPDVF DDLTSLEHLA AHSNGFSGFL PPSLSSLSSL RGLNLRNNTL
201: SGPIARVSFS GMPLLASVDF STNYLTGWLP ASLAGCGELK SLNLANNTLV GTIPSWIGEF DHLWYLNLSN NSFVGEVPKS LLRLKGLATA GRSSGMVFTN
301: MLLYVNDKRR ALNEQPNTIT GSNNTVKSGR NNSMSGNDNT VISGDNNAVS GSFNTLVCGD NNVLTGDHHV VSGSNHIVTN SYNKVSGCTN NVSGSHHTVS
401: GSNNAVSGSN NTVSGSNHVV SGSNKIVTDG
001: MNSLSFTLFI FSVITFLQCL SSTGAATCHP DDEAGLLAFK SGITQDPSGM LSSWKKGTSC CSWKGIICFN SDRVTMLELV GFPKKPERSL SGTLSPSLAK
101: LQHLSVISLG GHVNITGSFP KFLLQLPKLR YVDIQNNRLS GPLPANIGVL SLLEEIFLQG NKFTGPIPNS ISNLTRLSYL IFGGNLLTGT IPLGIANLKL
201: MQNLQLGDNR LSGTIPDIFE SMKLLKFLDL SSNEFYGKLP LSIATLAPTL LALQVSQNNL SGAIPNYISR FNKLEKLDLS KNRFSGVVPQ GFVNLTNINN
301: LDLSHNLLTG QFPDLTVNTI EYLDLSYNQF QLETIPQWVT LLPSVFLLKL AKCGIKMSLD DWKPAEPLYY HYIDLSKNEI SGSLERFLNE TRYLLEFRAA
401: ENKLRFDMGN LTFPRTLKTL DLSRNLVFGK VPVTVAGLQR LNLSQNHLCG ELPTTKFPAS AFAGNDCLCG SPLSPCKA
101: LQHLSVISLG GHVNITGSFP KFLLQLPKLR YVDIQNNRLS GPLPANIGVL SLLEEIFLQG NKFTGPIPNS ISNLTRLSYL IFGGNLLTGT IPLGIANLKL
201: MQNLQLGDNR LSGTIPDIFE SMKLLKFLDL SSNEFYGKLP LSIATLAPTL LALQVSQNNL SGAIPNYISR FNKLEKLDLS KNRFSGVVPQ GFVNLTNINN
301: LDLSHNLLTG QFPDLTVNTI EYLDLSYNQF QLETIPQWVT LLPSVFLLKL AKCGIKMSLD DWKPAEPLYY HYIDLSKNEI SGSLERFLNE TRYLLEFRAA
401: ENKLRFDMGN LTFPRTLKTL DLSRNLVFGK VPVTVAGLQR LNLSQNHLCG ELPTTKFPAS AFAGNDCLCG SPLSPCKA
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4HR91]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.