Factsheet for TraesCS4A01G345900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G527100.1	Wheat	vacuole	93.09	93.95
TraesCS5D01G526300.1	Wheat	extracellular	93.09	93.95
TraesCS4A01G346100.1	Wheat	vacuole	83.64	84.42
HORVU5Hr1G119580.1	Barley	cytosol	30.65	74.3
HORVU5Hr1G119550.1	Barley	extracellular, mitochondrion, plastid, vacuole	82.95	74.23
TraesCS4A01G346900.1	Wheat	extracellular, plasma membrane, vacuole	46.08	70.18
TraesCS4A01G347100.1	Wheat	extracellular	43.09	68.25
TraesCS4A01G344700.1	Wheat	extracellular, vacuole	65.9	67.45
TraesCS4A01G347000.1	Wheat	extracellular	44.24	67.13
TraesCS4A01G347200.1	Wheat	extracellular	44.01	66.32
TraesCS4A01G344600.1	Wheat	extracellular	63.13	64.78
TraesCS4A01G345700.1	Wheat	extracellular	60.6	64.15
TraesCS4A01G347300.1	Wheat	extracellular	32.26	63.06
TraesCS1A01G407200.1	Wheat	extracellular	18.89	58.57
TraesCS5A01G369400.1	Wheat	extracellular	44.24	51.89
TraesCS4A01G344800.1	Wheat	extracellular	16.59	50.7

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SMART:SM00369
SUPFAM:SSF101967	SUPFAM:SSF52058	InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G345900	EnsemblPlants:TraesCS4A01G345900.1
TIGR:cd12796	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:625076329..625077633

Molecular Weight (calculated)

45957.3 Da

IEP (calculated)

6.438

GRAVY (calculated)

0.006

Length

434 amino acids

Sequence
(BLAST)

001: MNPSSMERCC LLLLFVAFLW PAASATPCHP DDLRALRGFA GELGGGGALR TAWSGASCCA WEGVGCDSAS GRVTVLRLPW RGLAGHIPGA SLAGLVWLEE
101: LFLGSNHFEG VIPDELFGLV RLRKLSLASN ELTGELSPRL GELTHLTLLD LSANRFFGPL PDVFRDLTSL EHLAMHSNGF SGFLPPSLSS LSSLHELNLR
201: NNSMSGPIAR VSFSDMPLLA SLDFSTNSLT GWLPASLASC GELKSLNLAN NILVGTIPSW IGEFDNLWYL NLSNNSFVGE VPKSLLRLNG LATAGRSSGM
301: VFINMPSFVN HERRALDEQP NTITGTNNTV RSGRNNTMSG NDNIVMSGDS NTVSGSFNTL VCGNNNILSG DHHVVSGSNH IVTNSFNKVT GCTNNVSGSN
401: HTVSGSNNTV TGSSNTVSGN NHVVSGSNRV VTGD

Best Arabidopsis Sequence Match ( AT1G33610.1 )
(BLAST)

001: MNSLSFTLFI FSVITFLQCL SSTGAATCHP DDEAGLLAFK SGITQDPSGM LSSWKKGTSC CSWKGIICFN SDRVTMLELV GFPKKPERSL SGTLSPSLAK
101: LQHLSVISLG GHVNITGSFP KFLLQLPKLR YVDIQNNRLS GPLPANIGVL SLLEEIFLQG NKFTGPIPNS ISNLTRLSYL IFGGNLLTGT IPLGIANLKL
201: MQNLQLGDNR LSGTIPDIFE SMKLLKFLDL SSNEFYGKLP LSIATLAPTL LALQVSQNNL SGAIPNYISR FNKLEKLDLS KNRFSGVVPQ GFVNLTNINN
301: LDLSHNLLTG QFPDLTVNTI EYLDLSYNQF QLETIPQWVT LLPSVFLLKL AKCGIKMSLD DWKPAEPLYY HYIDLSKNEI SGSLERFLNE TRYLLEFRAA
401: ENKLRFDMGN LTFPRTLKTL DLSRNLVFGK VPVTVAGLQR LNLSQNHLCG ELPTTKFPAS AFAGNDCLCG SPLSPCKA

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4HR91]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.