Factsheet for TraesCS4A01G345700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G119520.5	Barley	endoplasmic reticulum, extracellular	85.37	80.28
TraesCS4A01G344700.1	Wheat	extracellular, vacuole	73.41	70.99
TraesCS4A01G344600.1	Wheat	extracellular	70.98	68.79
TraesCS4A01G346900.1	Wheat	extracellular, plasma membrane, vacuole	45.61	65.61
TraesCS1A01G407200.1	Wheat	extracellular	21.95	64.29
TraesCS4A01G347100.1	Wheat	extracellular	42.93	64.23
TraesCS4A01G347000.1	Wheat	extracellular	44.39	63.64
TraesCS4A01G346100.1	Wheat	vacuole	66.59	63.49
TraesCS4A01G347200.1	Wheat	extracellular	44.39	63.19
TraesCS4A01G347300.1	Wheat	extracellular	33.9	62.61
TraesCS4A01G345900.1	Wheat	extracellular	64.15	60.6
TraesCS4A01G344800.1	Wheat	extracellular	20.0	57.75
TraesCS5A01G369400.1	Wheat	extracellular	45.37	50.27

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SMART:SM00369	SUPFAM:SSF101967	SUPFAM:SSF52058
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G345700	EnsemblPlants:TraesCS4A01G345700.1	TIGR:cd12796	SEG:seg

Description

No Description!

Coordinates

chr4A:-:624991706..624992938

Molecular Weight (calculated)

43016.3 Da

IEP (calculated)

8.633

GRAVY (calculated)

0.022

Length

410 amino acids

Sequence
(BLAST)

001: MAKSWLLLFC LAFLLPAASA TCHPDDLRAL RGLARNLRGG GAAHLHSVWS GASCCDWEGV GCHGASGRVT ALRLHGHGLA GPIPGASLAG LIRLEELFLG
101: SNSFAGTLPD ELFSLAGLQR LSLASNNLAG QLSSRLSDLI NLTLLDLSIN HFSGHLPDNV FRDLMSLEHL VAHSNGFSGS LPPSLSSLSS LRELNLRNNS
201: LSGPISHVNF SGMPLLASVD LSTNYLNGLL PVSLADCGEL RSLSLANNRL VGTIPSWIGE LDHLHYLDLS NNSMIGKVPK SSTRLKGLAT VVGHSPGMAF
301: TNMPLYEKRN RRILGQQPNV ISGSRNTIRS GTNNVLSGND NTVISGNDNV VTGSNNVVSG SGNVVTERNH VVSGSDNVVS GRNNVVTGSN NVVSGRNHVV
401: SGNNKVVTGG

Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)

0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ

Arabidopsis Description

PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.