Factsheet for TraesCS5D01G525500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G347100.1	Wheat	extracellular	96.73	97.08
TraesCS5D01G525600.1	Wheat	extracellular	90.18	86.71
TraesCS5D01G525300.1	Wheat	extracellular	86.91	83.57
HORVU5Hr1G119480.1	Barley	extracellular	86.91	83.57
TraesCS5D01G525400.1	Wheat	extracellular	80.73	77.08
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	72.36	71.07
TraesCS5D01G526900.1	Wheat	extracellular	31.27	61.43
TraesCS5D01G563600.1	Wheat	extracellular	68.0	49.87
TraesCS5D01G563500.1	Wheat	extracellular	68.0	49.87
TraesCS5D01G563400.1	Wheat	extracellular	66.55	49.46
TraesCS5D01G561100.1	Wheat	extracellular	66.91	49.07
TraesCS5D01G378800.1	Wheat	extracellular	65.82	48.79
TraesCS5D01G563700.1	Wheat	extracellular	63.64	47.04
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	70.91	46.1
TraesCS5D01G526200.1	Wheat	extracellular	72.0	45.94
TraesCS5D01G526300.1	Wheat	extracellular	70.91	45.35
TraesCS5D01G526600.1	Wheat	extracellular	68.36	44.44
TraesCS5D01G527000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	61.82	42.08
TraesCS5D01G563300.1	Wheat	extracellular	43.64	38.1

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF08263	PFAM:PF13855	PFscan:PS51257	PANTHER:PTHR43932	SUPFAM:SSF101967	SUPFAM:SSF52058
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G525500	EnsemblPlants:TraesCS5D01G525500.1	TIGR:cd12796	SEG:seg

Description

No Description!

Coordinates

chr5D:+:543803619..543804446

Molecular Weight (calculated)

28121.1 Da

IEP (calculated)

8.170

GRAVY (calculated)

-0.041

Length

275 amino acids

Sequence
(BLAST)

001: MAKCWLLLHL LAFLLPAASA TSCHTDDLHA LQGFAGNLGG GGVLLRAVWS GASCCGWEGV SCDGTSGRVT ALRLPGHGLV GPIPGASLAG LTQLVELNLA
101: NNKLIGTIPS WIGELDHLCY LDLSNNSLVG EVPKTLIQLK GLVSTGRSLG NRRTLQQQQQ PNIISGTNNK VRSGRTNVVS GNDNTVISGN NNTVAGSNNT
201: ITTGSDNTVT GSNHVVSGSK HIVTDNNNVV SGIDNNVSGS FHTVSGSHNT VSGSNNTVSG SNHVVSGSNK VVTGG

Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)

0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ

Arabidopsis Description

PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.