Factsheet for TraesCS5D01G526900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G181100.1	Wheat	extracellular	95.0	95.68
TraesCS1A01G407200.1	Wheat	extracellular	93.57	93.57
TraesCS5B01G527600.1	Wheat	extracellular	89.29	89.29
TraesCS5D01G525500.1	Wheat	extracellular	61.43	31.27
TraesCS5D01G525400.1	Wheat	extracellular	61.43	29.86
TraesCS5D01G525300.1	Wheat	extracellular	60.71	29.72
TraesCS5D01G525600.1	Wheat	extracellular	60.0	29.37
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	50.71	25.36
TraesCS5D01G526600.1	Wheat	extracellular	64.29	21.28
TraesCS5D01G563300.1	Wheat	extracellular	47.14	20.95
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	62.86	20.8
TraesCS5D01G378800.1	Wheat	extracellular	54.29	20.49
TraesCS5D01G563400.1	Wheat	extracellular	52.86	20.0
TraesCS5D01G563500.1	Wheat	extracellular	53.57	20.0
TraesCS5D01G563600.1	Wheat	extracellular	53.57	20.0
TraesCS5D01G563700.1	Wheat	extracellular	52.86	19.89
TraesCS5D01G561100.1	Wheat	extracellular	52.14	19.47
TraesCS5D01G526200.1	Wheat	extracellular	57.86	18.79
TraesCS5D01G526300.1	Wheat	extracellular	56.43	18.37
TraesCS5D01G527000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	52.86	18.32

Protein Annotations

EnsemblPlants:TraesCS5D01G526900.1	EnsemblPlantsGene:TraesCS5D01G526900	Gene3D:2.150.10.10	InterPro:IPR011049	InterPro:Serralysin-like_metalloprot_C	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF101967	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5D:+:544491407..544491972

Molecular Weight (calculated)

14334.5 Da

IEP (calculated)

10.135

GRAVY (calculated)

-0.316

Length

140 amino acids

Sequence
(BLAST)

001: MAKCFLLLAF LAFLLPAAYA TCHADHLQAP RGFAGKSNRR TLQQQQQPNT ITGTNNSVRS GSGNIVSGSG NTVVSGDNNN VSGSNNTVTS GSSNVIVDTN
101: HVVTGSNNTV SGNNNRVTGN NNVVSGSNQV VSGDNKVVTG

Best Arabidopsis Sequence Match ( AT5G24290.1 )
(BLAST)

001: MEKSNQPVHV TLSELKDGDK EIVDAEFLVD LLESYRFGKD NVPAREFRSK AAATAPAPVN TTEIELEEDN DGSQAQGNNS VSESTSSLFS DSDPIVLEST
101: VSETGSNEES ETGSNEENGN NWLESSSTNL PNVENKRQRN GEDCEIEEEE ENNERSLSDS EEKSNLEKLL GTQENYELGN EDEEKNERSS SDSEEKSNLE
201: NLLATQENYE LYCPSCSTCI TRNVVLKKRK RGKHVNSSLD LKPDIPVVEP DEPSDIEEME SPVKVYVPET RIEDDQEDKE GTIFTCLVCD LKYFIRLGTK
301: FLQLDYIRGK PVEKSVEEYI DVRKSINTTQ SPPQIQPDGE RFAIELLKST VYGGLTETIT SLGVVSSASA SGSSTMNILA LAVANLAGGL IVLAQNFQDL
401: RNSSDQEKDR YEELLGRRTK SRIHILVAVM SYIFFGLIPP LVYAFSFYET GIKNYKLISV FLGSLVCVIL LGSIKVYVRK PTNSCGSTKA YLKSAAYYTS
501: IVVASCGISY VVGDIMGEYI EKLSLVGLDQ ISITSPCYGI KPEECRFTSF

Arabidopsis Description

MEB2Membrane protein of ER body 2 [Source:UniProtKB/Swiss-Prot;Acc:F4KFS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.