Factsheet for TraesCS5D01G525700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G346900.1	Wheat	extracellular, plasma membrane, vacuole	85.0	83.51
TraesCS5B01G526500.1	Wheat	extracellular	82.5	81.05
TraesCS5D01G525500.1	Wheat	extracellular	71.07	72.36
TraesCS5D01G525600.1	Wheat	extracellular	71.79	70.28
TraesCS5D01G525400.1	Wheat	extracellular	71.79	69.79
TraesCS5D01G525300.1	Wheat	extracellular	68.57	67.13
TraesCS5D01G526900.1	Wheat	extracellular	25.36	50.71
TraesCS5D01G378800.1	Wheat	extracellular	62.86	47.44
TraesCS5D01G563600.1	Wheat	extracellular	62.14	46.4
TraesCS5D01G563500.1	Wheat	extracellular	62.14	46.4
TraesCS5D01G563400.1	Wheat	extracellular	61.07	46.22
TraesCS5D01G561100.1	Wheat	extracellular	61.79	46.13
TraesCS5D01G563700.1	Wheat	extracellular	58.21	43.82
TraesCS5D01G526200.1	Wheat	extracellular	66.07	42.92
TraesCS5D01G526600.1	Wheat	extracellular	63.93	42.32
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	63.21	41.84
TraesCS5D01G563300.1	Wheat	extracellular	46.43	41.27
TraesCS5D01G526300.1	Wheat	extracellular	63.21	41.16
TraesCS5D01G527000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	57.5	39.85

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SUPFAM:SSF52058	SUPFAM:SSF69349
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G525700	EnsemblPlants:TraesCS5D01G525700.1	TIGR:cd12796	SEG:seg

Description

No Description!

Coordinates

chr5D:+:543830615..543831457

Molecular Weight (calculated)

29105.9 Da

IEP (calculated)

8.131

GRAVY (calculated)

0.114

Length

280 amino acids

Sequence
(BLAST)

001: MAKCGLLLLF LAFLLPAARA TSCHPDDLRA LRGFAGNLSG GAALLRAAWS GASCCVWEGV NCDGTSGRVT ALRLPGHGLV GLIPGASLAG LARLEELNLA
101: NNKLVGTIPS WIGELDHLCY LDLSDNSLVG EVPKSLIRLK GLVIAGHSLG MVFTNMPLYV KRNRRTLDEQ PNTISGSNNT VRSGSTNVVS GNDNTVISGN
201: NNNVAGSNNT VITGNDNTVT GSNHVVSGDK HIVTDNNNAV SGTIMYPGAS IPYPGATILY LGPTTLYLGA TMSYLGATRS

Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)

0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ

Arabidopsis Description

PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.