Factsheet for TraesCS5D01G527000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G526600.1	Wheat	extracellular	79.95	76.36
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	74.5	71.16
TraesCS5D01G526200.1	Wheat	extracellular	67.33	63.11
TraesCS5D01G525500.1	Wheat	extracellular	42.08	61.82
TraesCS5D01G525600.1	Wheat	extracellular	43.56	61.54
TraesCS5D01G526300.1	Wheat	extracellular	63.37	59.53
TraesCS5D01G525300.1	Wheat	extracellular	42.08	59.44
TraesCS5D01G525400.1	Wheat	extracellular	42.33	59.38
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	39.85	57.5
TraesCS5D01G526900.1	Wheat	extracellular	18.32	52.86
TraesCS5D01G563500.1	Wheat	extracellular	45.54	49.07
TraesCS5D01G563600.1	Wheat	extracellular	45.54	49.07
TraesCS5D01G563400.1	Wheat	extracellular	44.06	48.11
TraesCS5D01G561100.1	Wheat	extracellular	44.55	48.0
TraesCS5D01G378800.1	Wheat	extracellular	44.06	47.98
TraesCS5D01G563700.1	Wheat	extracellular	41.83	45.43
TraesCS5D01G563300.1	Wheat	extracellular	32.18	41.27

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SMART:SM00369
SUPFAM:SSF101967	SUPFAM:SSF52058	InterPro:Serralysin-like_metalloprot_C	EnsemblPlantsGene:TraesCS5D01G527000	EnsemblPlants:TraesCS5D01G527000.1	TIGR:cd12796
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:544532448..544533952

Molecular Weight (calculated)

42408.1 Da

IEP (calculated)

6.733

GRAVY (calculated)

-0.056

Length

404 amino acids

Sequence
(BLAST)

001: MVPSDDLRAL RGFAGNLSGG GVLLRAAWRG TSCCSWEGVG CDGASGRVTA LRLPGHDLAG PIPGASLAGL TRLEELFLGS NSFTGSLPEA LFGLVGLQNL
101: SLESNELTGQ LSSRLHKLKV LTLLDLSINR FSGRLPDDVL CDLTSLEHLV MHSNNFFGSL PPSLSSLSSL RELSLRNNSL SGPLARVNFS GMPLLASVDF
201: AANYLNGSLP TSLADCNVLK SLSLASNQLV GTIPLWIGEL DHLHYLDLSD NSLVGEVPKG LTLLKGLTAA DHSPGMAFTN MSFYVKCHRR TLQQQKPNVI
301: TGTNNFVKSG EGNVVSGNDN TVVSGDSNTV SGSDNTVTSG DKNVLTGSNH VVSRSNNVVS KNDHVVNGNG NTVSGGNNKV TGNNNVVSWS DHVVYGNDRV
401: VTGG

Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)

0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ

Arabidopsis Description

PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.