Factsheet for TraesCS5D01G563600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G563500.1	Wheat	extracellular	100.0	100.0
TraesCS5D01G563400.1	Wheat	extracellular	85.33	86.49
TraesCS5D01G561100.1	Wheat	extracellular	84.0	84.0
HORVU5Hr1G118200.1	Barley	endoplasmic reticulum, mitochondrion, vacuole	86.67	82.7
TraesCS5D01G378800.1	Wheat	extracellular	69.07	69.81
TraesCS5D01G563300.1	Wheat	extracellular	57.87	68.89
TraesCS5D01G563700.1	Wheat	extracellular	67.47	68.01
TraesCS5D01G525500.1	Wheat	extracellular	49.87	68.0
TraesCS5D01G525600.1	Wheat	extracellular	50.4	66.08
TraesCS5D01G525300.1	Wheat	extracellular	50.4	66.08
TraesCS5D01G525400.1	Wheat	extracellular	49.6	64.58
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	46.4	62.14
TraesCS5D01G526900.1	Wheat	extracellular	20.0	53.57
TraesCS5D01G526200.1	Wheat	extracellular	54.67	47.56
TraesCS5D01G526600.1	Wheat	extracellular	53.6	47.52
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	52.53	46.57
TraesCS5D01G526300.1	Wheat	extracellular	52.8	46.05
TraesCS5D01G527000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	49.07	45.54

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF08263	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SUPFAM:SSF101967	SUPFAM:SSF52058
InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G563600	EnsemblPlants:TraesCS5D01G563600.1	TIGR:cd12796
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:562529984..562531111

Molecular Weight (calculated)

39319.9 Da

IEP (calculated)

6.971

GRAVY (calculated)

0.075

Length

375 amino acids

Sequence
(BLAST)

001: MNPMAKCCLL LLPIFFLAFL LPEAHATSCH PDDLRALQDF VRNLSGGGVL LQATWFGAAC CSWEGVSCDA ASGRVTALHL PRRGLVGPIP GTSLAGLARL
101: EELDLGSNNF QNISGVLTVL RGCQNLTTLI LTKNFGGEEL LGDGIIGGFK SLEVLALGDC ALKGRVPEWL SQCKKMEVLD LSGNQLVGTI PSWIGELHHL
201: CYLDLSNNSL VGDAPKSLAL LKGLAPDGHS SGMVFTNIPS YVKHNRSTLG RRLNELPNVI TGTNNFVTSG SNNVLSGNDN TVIFGDENTV SGNNHAIYGD
301: ENTVSGNNHV VSGSKHVVSG SRHGVTGRSS VVSGFNNGVS GINHVVSGSN NVVSGSNNVV SGMNHIVSGN NKVIT

Best Arabidopsis Sequence Match ( AT2G02220.1 )
(BLAST)

0001: MRVHRFCVIV IFLTELLCFF YSSESQTTSR CHPHDLEALR DFIAHLEPKP DGWINSSSST DCCNWTGITC NSNNTGRVIR LELGNKKLSG KLSESLGKLD
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV

Arabidopsis Description

PSKR1Phytosulfokine receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.