Factsheet for TraesCS5D01G525600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G347000.1	Wheat	extracellular	97.55	97.55
TraesCS5B01G526600.1	Wheat	extracellular	95.1	95.1
TraesCS5D01G525500.1	Wheat	extracellular	86.71	90.18
HORVU5Hr1G119480.1	Barley	extracellular	86.01	86.01
TraesCS5D01G525300.1	Wheat	extracellular	84.97	84.97
TraesCS5D01G525400.1	Wheat	extracellular	80.42	79.86
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	70.28	71.79
TraesCS5D01G526900.1	Wheat	extracellular	29.37	60.0
TraesCS5D01G563400.1	Wheat	extracellular	65.73	50.81
TraesCS5D01G563600.1	Wheat	extracellular	66.08	50.4
TraesCS5D01G563500.1	Wheat	extracellular	66.08	50.4
TraesCS5D01G561100.1	Wheat	extracellular	65.73	50.13
TraesCS5D01G378800.1	Wheat	extracellular	64.34	49.6
TraesCS5D01G563700.1	Wheat	extracellular	61.19	47.04
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	69.23	46.81
TraesCS5D01G526200.1	Wheat	extracellular	70.28	46.64
TraesCS5D01G526600.1	Wheat	extracellular	67.48	45.63
TraesCS5D01G526300.1	Wheat	extracellular	68.18	45.35
TraesCS5D01G527000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	61.54	43.56
TraesCS5D01G563300.1	Wheat	extracellular	44.76	40.63

Protein Annotations

Gene3D:2.150.10.10	Gene3D:3.80.10.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF08263	PFAM:PF13855	PFscan:PS51257	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	SUPFAM:SSF101967
SUPFAM:SSF52058	InterPro:Serralysin-like_metalloprot_C	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G525600	EnsemblPlants:TraesCS5D01G525600.1	TIGR:cd12796
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:543817184..543818044

Molecular Weight (calculated)

29578.0 Da

IEP (calculated)

8.623

GRAVY (calculated)

-0.032

Length

286 amino acids

Sequence
(BLAST)

001: MAKCWLLLQF LAFLLPATSA TSCHTDDLHA LQGFAGNLSG GGVLLRAVWT GVSCCGWEGV SCDGTSGRVT GLRLPGRGLA GPIPRASLAG LAQLEELNLA
101: NNKLIGTIPS WIGELDHLCY LDLSDNLLVG EVSKSLIQLK GFATTGRSLG MAFTNMPLYV KRSRRTLQQQ QPNIISGTNN KVRSGRTNVV SGNDNTVVSG
201: NDNTVAGSNN TITTGSGNTV TGSNHVVSGT KHIVTDNNNV VSGIDNNVSG SFHTVSGTLN TVSGSNNTVS GSNHVVSGSN KVVTGG

Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)

0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ

Arabidopsis Description

PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.