Factsheet for TraesCS5D01G378800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G371700.1	Wheat	extracellular	96.23	96.49
TraesCS5A01G369400.1	Wheat	extracellular	92.45	92.7
HORVU5Hr1G091960.1	Barley	extracellular	12.67	90.38
HORVU5Hr1G091950.1	Barley	mitochondrion	71.16	87.71
TraesCS5D01G563700.1	Wheat	extracellular	87.33	87.1
TraesCS5D01G561100.1	Wheat	extracellular	70.35	69.6
TraesCS5D01G563500.1	Wheat	extracellular	69.81	69.07
TraesCS5D01G563600.1	Wheat	extracellular	69.81	69.07
TraesCS5D01G563400.1	Wheat	extracellular	67.66	67.84
TraesCS5D01G525500.1	Wheat	extracellular	48.79	65.82
TraesCS5D01G525600.1	Wheat	extracellular	49.6	64.34
TraesCS5D01G525300.1	Wheat	extracellular	48.79	63.29
TraesCS5D01G525700.1	Wheat	extracellular, plasma membrane, vacuole	47.44	62.86
TraesCS5D01G525400.1	Wheat	extracellular	47.98	61.81
TraesCS5D01G526900.1	Wheat	extracellular	20.49	54.29
TraesCS5D01G563300.1	Wheat	extracellular	44.47	52.38
TraesCS5D01G526200.1	Wheat	extracellular	54.18	46.64
TraesCS5D01G526800.1	Wheat	extracellular, vacuole	52.56	46.1
TraesCS5D01G526600.1	Wheat	extracellular	51.75	45.39
TraesCS5D01G526300.1	Wheat	extracellular	51.75	44.65
TraesCS5D01G527000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	47.98	44.06

Protein Annotations

EnsemblPlants:TraesCS5D01G378800.1	EnsemblPlantsGene:TraesCS5D01G378800	Gene3D:2.150.10.10	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR011049	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Serralysin-like_metalloprot_C	PANTHER:PTHR43932	PANTHER:PTHR43932:SF10	PFAM:PF13855	PFscan:PS51450	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF101967	SUPFAM:SSF52058	TIGR:cd12796	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:-:450203777..450204990

Molecular Weight (calculated)

38959.8 Da

IEP (calculated)

8.371

GRAVY (calculated)

0.027

Length

371 amino acids

Sequence
(BLAST)

001: MNPMVKCCLL LLLFLAVLLP EARATSCHPD DLHALRGFAG NLSRGAVLLR AAWSGDMCCG WDGVGCDGTD GRVTALRLPG RGLVGPIPGA SLAGLMRLEE
101: LDLGYNSLHN ISGALTMLRG CQNLSTLILT KNFGGEELPG DGIIAGFKSL VVLDLGDCAL KGRVPEWLSQ CKNMEVLDLS RNQLVGTIPS WIGRLDHLCY
201: LDLSNNTLVG EVPKSSKGLN TSGCSPGISF TNMSLYLKRS GTSILRRQLK HAPNVIAGTN NIVRSGSNNV VAGNDNTIIF GNNNAVSGSY QVVYGNNHVV
301: TGDNHVVSGS NHAASGSHHV VIGKHNIVSG THNDVGGSKN IVSGSNNVVS GSHNTVSGKN HFVTGHNKVV T

Best Arabidopsis Sequence Match ( AT2G02220.1 )
(BLAST)

0001: MRVHRFCVIV IFLTELLCFF YSSESQTTSR CHPHDLEALR DFIAHLEPKP DGWINSSSST DCCNWTGITC NSNNTGRVIR LELGNKKLSG KLSESLGKLD
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV

Arabidopsis Description

PSKR1Phytosulfokine receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.